Sporomusa ovata: SOV_18220
Help
Entry
SOV_18220 CDS
T10406
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sova Sporomusa ovata
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sova03032
]
SOV_18220 (topA)
03400 DNA repair and recombination proteins [BR:
sova03400
]
SOV_18220 (topA)
Enzymes [BR:
sova01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SOV_18220 (topA)
DNA replication proteins [BR:
sova03032
]
Prokaryotic type
DNA Topoisomerases
SOV_18220 (topA)
DNA repair and recombination proteins [BR:
sova03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SOV_18220 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
WWV70527
LinkDB
All DBs
Position
1847567..1849765
Genome browser
AA seq
732 aa
AA seq
DB search
MSKALVVVESPAKAKTIEKFLGKNYTVKASMGHLRDLPKSQFGVNLENGFEPKYINIRGK
GDLIKSLKGAAKNADIVYLATDPDREGEAIAWHLAHILNIPEQTTCRIEFNEITKTAIQQ
AVKNPRPINLPRVYAQQARRILDRIVGYKLSPLLWRKVRKGLSAGRVQSVAVRLICDREK
EIQAFTPEEYWTIIAKLKEKTNSKAFDAELVAIDGQKSAINGELQAESIVSELNQAEYIV
SDVKKRERKRNPQPPFTTSSLQQEAARKLGFTSRKTMIIAQQLYEGLTIGNMGQVGLITY
MRTDSTRVAESAQQEARSYIENKFGLNYLPAKAPTYANKKSQDAHEAVRPTTLDLTPDAV
ATSLNKDQLKLYTLIWERFIASQMTPAIYDTLTIEITAGRYKLRATGSQIKFPGFLAAFS
GAIGKSKEVEQTADSDLDKETTLPALLAGQVLKLNRLEPKQHFTEPPPRYTEASLVKVLE
EKGIGRPSTYAPTIETIVDRGYVERIEKKFHPTELGFVVLDLLKQYFDKILDVEFTAGME
DKLDDIAEGDASWLNVLEEFYAPFAQDLSLAEEAIGHVELPVEVSDVPCENCGQMMVVKQ
GRYGNFLACPGFPACRNTKPILKDTGVKCPKCGGSIVERHTKRRRVFYGCEKYPECDFNT
WDMPLKENCQVCGAYMVRHKFKNGGFSSICSNENCSSRQATDSAKTAADAEEKEVQAKAK
KKPAANRRKNNG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaagctctagttgtagtagaatccccggctaaagccaagacaatagaaaagttt
cttgggaaaaattatacagtcaaagcctctatgggacatttgcgtgatttgcctaaaagt
caatttggtgttaatcttgaaaatggctttgaaccaaagtatattaatatccgaggtaaa
ggagatctcataaaaagcctaaaaggagcagccaaaaatgccgatattgtttatctggca
acagacccggatcgcgaaggggaagctattgcctggcatttggcgcacatcctcaatatt
ccggagcaaactacctgccggattgagtttaacgagattacaaaaacggctattcagcaa
gcggtcaaaaacccacgccctattaatttgccgcgggtttacgcccagcaagccaggcga
attctagaccggatagtgggctataagctgagtccgctcttgtggcggaaagtgcgtaag
ggattaagtgctggccgggtacaatcagttgccgtccggctaatttgtgatagagagaaa
gagatacaggcatttactccggaagaatattggacgataatagccaaacttaaagaaaag
acgaattcaaaagcgtttgatgctgaattagtagctattgatggtcaaaaaagtgcgatt
aatggcgagctgcaagcagagagcattgtcagtgagttgaatcaagcggaatatatagtg
agtgatgttaaaaaacgggaaagaaagcgtaatcctcaaccgccctttactaccagtagt
ttgcaacaagaggctgcccgtaaattggggtttacttcccgtaagaccatgataattgcg
caacaattgtatgaagggcttactattggtaatatggggcaagttggtcttattacctat
atgcgtaccgattctacccgcgtggctgagagtgctcaacaggaagctcgaagttatatt
gagaataaatttgggctaaattatctgccggcgaaggcaccaacctatgctaataaaaaa
tctcaggatgcccatgaggcagttaggccaactaccctggatttaactccagatgctgtt
gccactagcttgaacaaagatcagttaaagctctatacacttatctgggaaagattcata
gctagtcagatgacacctgcgatttatgatacacttactatcgagattactgctggaagg
tataaactccgagctactggatcacaaataaaattcccgggttttttagccgcgtttagt
ggcgcaattggtaagagtaaagaggtagaacaaactgctgatagtgacttagataaggaa
accactctacctgcattactggcagggcaagtgttgaaacttaacaggctagaacctaaa
caacattttaccgaaccaccgcctcgctacacagaggcatccttggtcaaagtcttagag
gaaaagggaattggacgtcccagcacctatgcaccaaccattgagacaattgttgaccgg
ggttatgttgagagaattgagaaaaaatttcatcctaccgagctgggatttgtggtactt
gaccttctaaagcaatactttgataagattctagatgttgaatttactgctggaatggaa
gataagttagatgatattgccgaaggtgatgcctcgtggttaaatgtattagaagaattt
tatgccccttttgcgcaagatctaagtttggctgaagaagcgattggccatgtcgaatta
cctgtcgaagtatctgatgttccctgtgaaaattgtggccaaatgatggtcgtcaaacag
gggcggtatggcaatttcttagcatgccccgggtttccggcttgccgcaatactaagccg
attttaaaagatactggtgttaagtgtcccaaatgcggcggctctattgttgaacgtcac
acaaaacgccggcgagtcttttacggctgtgagaaatatccggaatgtgattttaatacc
tgggatatgccgttgaaagagaattgtcaggtatgtggggcctatatggtcagacataaa
tttaaaaatggtggtttttctagcatttgcagtaatgagaactgctcgtcccgtcaagca
actgacagtgctaaaaccgctgcggacgcagaagaaaaagaagtacaggcaaaggcgaaa
aagaaacctgcagctaaccggaggaaaaataatggataa
DBGET
integrated database retrieval system
