Sporomusa ovata: SOV_18890
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Entry
SOV_18890 CDS
T10406
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sova Sporomusa ovata
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sova03016
]
SOV_18890 (truB)
Enzymes [BR:
sova01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SOV_18890 (truB)
Transfer RNA biogenesis [BR:
sova03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SOV_18890 (truB)
Prokaryotic type
SOV_18890 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DKCLD
SAWADEE
Motif
Other DBs
NCBI-ProteinID:
WWV70594
LinkDB
All DBs
Position
1909554..1910435
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AA seq
293 aa
AA seq
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MQSGIINVLKPPGMTSHDVVSYIRRLYSIKRVGHAGTLDPAAAGVLPVFIGKATRLVEYL
ADADKSYRAELTFGFETDTGDDTGKILNSRSYIRPELSEIEAALASFVGENEQIPPMYSA
IKIGGKKLYELARQGQVVERKPRKIIINTISLVTECETGIVFDVTCSKGTYIRVLCADIG
SRLNCLAVMSFLVRTRVGSFHLEQALTLEEIAANKEQAIQTADSVLTHLPAIMLSEQEAQ
AIKNGRSICCKQSGSDLIKMYDRESTFIGIGRETCQLGGHVTLTPVKILSPGL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcgggataattaatgtacttaaaccaccgggcatgacatcacatgatgttgtg
tcgtatatccggcggctatatagcataaagcgtgttgggcatgcgggtaccttggatcct
gcagcagcaggcgtattacccgtgtttattggcaaagcaacaaggcttgtagaatacctg
gctgacgcagataaaagctatcgggctgagcttacctttggctttgaaacagatactggt
gatgataccggaaaaattttaaatagtcgctcatatattcggcctgagttaagtgagatt
gaggctgcacttgcttcttttgtcggtgaaaatgagcaaattccgccgatgtattctgct
ataaaaattggtggtaaaaagctgtatgaactggccaggcaaggtcaggttgttgagcga
aaaccacgtaaaattataatcaatacgatctcacttgtaaccgaatgcgaaacaggtatt
gtatttgatgtaacctgttctaaaggaacctatattagggtcttgtgtgctgatatcggc
tcccggttaaattgcttggcagtaatgagttttctagtcaggacaagagtaggaagtttt
catttagagcaggctttaactcttgaagaaattgccgctaataaagagcaagctattcaa
actgcggatagtgttttgactcatctgccagcgatcatgttgtcagaacaagaagcccag
gctataaaaaatgggcgtagtatctgctgcaagcaaagcggttctgatttaataaaaatg
tatgacagggaaagcaccttcattggtattggtcgagaaacatgtcaactgggcggacat
gtaacactaactcccgtgaaaatattaagtccgggcctgtaa
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