Sporomusa ovata: SOV_21080
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Entry
SOV_21080 CDS
T10406
Symbol
pbpF_1
Name
(GenBank) Penicillin-binding protein 1F
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
sova Sporomusa ovata
Pathway
sova00550
Peptidoglycan biosynthesis
sova01100
Metabolic pathways
sova01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SOV_21080 (pbpF_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SOV_21080 (pbpF_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sova01003
]
SOV_21080 (pbpF_1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sova01011
]
SOV_21080 (pbpF_1)
Enzymes [BR:
sova01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
SOV_21080 (pbpF_1)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SOV_21080 (pbpF_1)
Glycosyltransferases [BR:
sova01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SOV_21080 (pbpF_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
sova01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SOV_21080 (pbpF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
DUF7004
Motif
Other DBs
NCBI-ProteinID:
WWV70805
LinkDB
All DBs
Position
complement(2129003..2131168)
Genome browser
AA seq
721 aa
AA seq
DB search
MQDKFNENQENSRRRPTKNSRRFAIIATLVFLVMVMGAGLGFITASIHTMPSLKGDIRPA
VSSQIFDANGKLITTIHSVENRLPASINKVPKNLQHAFIATEDARFYQHSGVDPRGILRA
VWSNLTDKGISEGGSTITQQLARNALLSQDQTIKRKIQEAFLSLQIERQYSKEEILEMYM
NHIYFGQGAYGVQTAAQVYFGKNVEDLNLAECAMIAGIPKSPNYYSPTSNLKAAKERQGV
VLEQMVKYGYIDSLSAAKARATEIKLAARPKTATAPAAYFTDYVIQVLIDKYGADAVYKD
GLKVYTTLDLEMQNKAEEAMKKLPTMKTDENGIKQPQGALVAIEPHNGHIKAMVGGRGND
QFNRAVLAERQPGSAFKPFVYLAAIESGFTPASIIADSPVSFGGWSPVNYDRSFHGSVTM
RTALEQSLNVVAVKLAQQAGIDKTLYYAQQMGISTLVLDGNTNDRNLAMSLGGLTRGVTP
LEIASAYGVLANSGIRVEPTAIVKVIDRNGKVIEEYVPKEKIVVNERSAFLLTDMLKGVM
TNGTGTGAYFGRPAAGKTGTTSDYKDAWFVGFTPDLVAAVWLGCDNPDYLNGITGGTVPA
SIWKSFMSGVADKYVARDFVKPSGIIAARVSNKDGLLVNDPNNKDGRSEIFVEGTQPTKV
STVPASKDSKDNKDGKGKDGKNTNNDSTAAGEQTLPPPPARGDNTTIAPPPPPKPNDGKK
N
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaatttaatgaaaaccaagaaaatagtcggcgacgccccactaaaaattca
cgaagatttgcgattattgcgactctcgtgttcttggttatggtgatgggggccggattg
ggttttataactgctagtattcataccatgcccagcttaaaaggcgacatacgccctgcc
gtttcttcccaaatttttgatgctaatggaaaacttattaccacaattcactcggttgag
aatcgtctaccggcatctatcaataaagtaccaaaaaatctgcagcatgcttttattgct
actgaagatgcccgtttttatcaacatagtggtgtcgatcctcgtggtattttgcgtgct
gtctggtctaatctgacagacaagggaatttctgaaggcggcagtacgataacccagcag
cttgccagaaatgccttactttctcaagatcaaacaatcaaacgtaaaattcaggaagca
tttttatcattgcaaattgagcggcaatatagcaaagaagaaatcctggaaatgtatatg
aaccacatctattttgggcaaggtgcttatggggttcagacagcagcgcaagtatatttt
ggcaagaatgtcgaagatttaaacttagctgaatgtgctatgattgccggtataccgaaa
agtcctaactattattcacctacaagcaatttaaaagctgctaaagaacgacaaggtgtt
gtgcttgaacaaatggtcaaatatggctatattgattctctttcggctgctaaagcaaga
gcaactgaaattaaactagctgcccgtccaaaaaccgctactgcacctgctgcgtatttt
actgactatgtaatacaagttcttattgataaatatggtgctgatgccgtatataaagat
ggtcttaaagtatatacaacattagatcttgaaatgcaaaacaaggcagaagaagccatg
aagaagctgccaacaatgaaaacagatgagaatggcattaaacaaccacagggagcactt
gtcgccattgaaccccataatggtcatataaaagcaatggttggtggtcggggcaatgat
caatttaaccgggccgttttagcagaacgtcaaccaggttcggcgtttaaaccatttgtt
tatttagcagctattgaaagtggttttacgccagcaagtattattgctgatagccctgtt
agctttggtggttggtcaccggtgaattatgataggagctttcatggttcggtaacaatg
cgaactgcacttgaacagtcgttgaatgtagttgctgtcaaactggcgcaacaggctggt
attgataaaacgttatactatgcgcagcagatggggatctctacgctagtacttgatggt
aatactaatgaccggaatttagccatgtcattaggtggtcttaccaggggcgttaccccg
ctggaaattgccagcgcctatggggtactggcaaatagcggcattcgggttgagcctacg
gccattgtcaaggtaattgatcgcaatggcaaagtaattgaggaatatgttccgaaagaa
aaaatcgttgttaatgaacgcagtgcattcctgctcaccgatatgctgaagggagttatg
accaatggtacaggtacaggtgcttactttggccgcccggctgctggtaaaacaggtacc
accagtgattataaggatgcttggtttgtgggctttacgcctgatttagtggccgctgtc
tggctgggttgtgataatccggattatttaaacggcattactggcggcacagtccctgct
agtatttggaaaagttttatgagtggtgttgcagacaaatacgtggcgcgtgattttgtc
aaaccctccggcatcatagctgccagagtctcaaataaagatggtctgctagtaaatgat
cctaataataaggacggtcgcagtgaaatttttgttgaaggcactcagcctactaaagtg
tcaacagttcctgcgtcaaaagatagtaaggataataaagatggtaaaggtaaagatggt
aagaatactaataacgacagcacggctgcaggcgagcagactttgccaccaccgcccgca
agaggcgataatactacgatagcacctccacccccacctaaacctaatgatgggaaaaag
aattag
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