Sporomusa ovata: SOV_23370
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Entry
SOV_23370 CDS
T10406
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sova Sporomusa ovata
Pathway
sova03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOV_23370 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sova03019
]
SOV_23370 (recQ)
03400 DNA repair and recombination proteins [BR:
sova03400
]
SOV_23370 (recQ)
Enzymes [BR:
sova01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SOV_23370 (recQ)
Messenger RNA biogenesis [BR:
sova03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SOV_23370 (recQ)
DNA repair and recombination proteins [BR:
sova03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SOV_23370 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
WWV71031
LinkDB
All DBs
Position
2332872..2335034
Genome browser
AA seq
720 aa
AA seq
DB search
MLTKAREILKKYYGYDEFRPGQAKVIGSLLGGKDTVAIMPTGAGKSLCFQIPAMLLPGIT
IVVSPLISLMKDQVDALAGQGIPATFINSSLTGAEAGRRLQHMRAGHYKLVYVAPERLTA
DWFQAAVGELKISMLAIDEAHCVSQWGHDFRPSYRNVGTFIASLPARPVIGAFTATATPE
VKNDIENLLALRWPQVHITGFDRPNLSFSVLRGENKQQFVMKYIKANANQAGIIYAATRK
EVDSLYELLRKKGFAAGRYHAGLSDQERMSQQEQFLYDDIRVMVATNAFGMGIDKSNVRY
VVHYNMPKNMESYYQEAGRSGRDGAPGECILLFGPQDPMLQRFLIDKSVEHPERKQHELK
KLQEMVDYCHTPDCLRQYILHYFGEATTNEGCGNCGNCMADGEQVDITVDAQKVFSCIYR
MKERFGIAVIADVLKGSKNKKVQQLGFDQLPTYGLMAERTVQDIKTLVQRLLATGYLRLT
ESEYPVVKLEPEAFLVLRSEARVWQKVFTERQPVQDDSLFELLRQCRKRISERENIPPFV
VFADTTLREMSQQRPADLLAMRQIKGVGELKLQKYGGEFLGIITAYLTENIAAASYAEVA
AVSAPTKKMAAKKTSKADSEPSHIVTLAMYRQGLDLEDIAKSRDLTVNTLQNHLVRCAQE
GHAIDWDRLIPTQYEELIIAAIKQIGTGQLRPLKEALPDDVSYGAIKAVLCKHFATPGKS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaaggctcgggaaatattaaaaaaatattatggttacgacgagtttcggcca
ggacaggctaaagttattggtagtctgcttggcggtaaggacacggtagccattatgccg
accggggcaggcaaatcgttgtgttttcagattccggcgatgctgctgccgggtattacc
atagtggtttcaccgcttatttcgctcatgaaggatcaggtggatgcgttagccgggcag
gggattcctgctacttttattaacagttcgctgaccggtgcggaagctgggcggcggttg
cagcatatgcgcgccggccattataaactggtctatgtggcgcctgaacggctgactgcc
gactggtttcaggcggcggtgggtgaacttaaaataagtatgctggctattgacgaagcc
cactgtgtttcgcaatggggccatgactttcgtccaagctatcgaaatgtgggtacgttt
attgccagtttgcctgcaagaccggtaattggtgcttttacggctactgccacccctgag
gtaaagaatgacattgagaacttgttggctttacggtggccgcaagttcatataacaggg
tttgaccggcctaatctctctttttccgtcctgcgcggcgaaaacaaacagcagtttgtg
atgaaatatattaaggctaacgccaatcaagccggtattatctatgcagctacccgcaaa
gaagttgacagcctgtatgaattgctcaggaaaaaggggtttgctgccgggcggtatcat
gccgggttaagtgatcaggagcgtatgtcccagcaggaacaatttctctatgatgatatc
cgggttatggtggccactaatgcttttggtatggggatcgacaaatccaatgtgcgttat
gtagtgcactataatatgccaaagaatatggagtcttactaccaagaagctggtcgcagc
ggacgggatggcgcaccgggagaatgtatcctgctgtttgggccgcaagatccaatgtta
caacggtttttgattgataagtctgttgagcatccggaacgcaaacaacatgaactaaag
aaactgcaggaaatggtggattattgtcacactcctgactgtttgcggcaatatatatta
cattattttggcgaagcgacgacaaatgaaggctgcggcaattgtggcaactgtatggct
gacggcgaacaggtcgatattacggttgatgcccagaaggttttttcctgcatttaccgc
atgaaggagcggttcggtattgcggttattgctgatgtgctcaaaggctcgaaaaacaaa
aaggtccagcaattgggctttgaccagttgccgacttatggcttgatggcagagcgtact
gtgcaggacattaaaaccctggtgcaacgcttgctggccacagggtatctgcgtttgact
gagagtgaatatccggtagtaaaattagaaccggaagcgtttttagtgctgcgcagtgag
gccagagtttggcaaaaggtatttaccgaacgtcagccagtccaggacgattccttattt
gaactgctgcggcagtgtcgaaaacgcatctctgagcgggaaaatataccaccatttgtt
gtgtttgccgacaccaccctgcgggagatgagccagcagcgaccggcagacttacttgct
atgcgccaaatcaagggtgttggcgagcttaaattgcaaaaatatggcggggaatttctg
ggaataattactgcctatctgacagaaaacattgctgcagcaagttatgcagaggtggct
gctgtttcggcaccaaccaaaaagatggcagccaaaaagaccagcaaggcagattctgaa
cccagccatattgtaacgctggctatgtaccggcaaggccttgacttagaggacattgcc
aagtcgcgggatttaacggttaacacactgcaaaatcatctggtacgttgcgcgcaggag
gggcatgctattgactgggacagacttattcctacccagtatgaagagcttattattgcg
gcgataaaacaaattggcacaggccaattgagaccacttaaagaggccctgcctgatgat
gtgagctatggtgccattaaggcggttttatgtaagcattttgccacgccaggcaagtcg
tag
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