Sporomusa ovata: SOV_23620
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Entry
SOV_23620 CDS
T10406
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sova Sporomusa ovata
Pathway
sova03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOV_23620 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sova03400
]
SOV_23620 (nfo)
Enzymes [BR:
sova01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SOV_23620 (nfo)
DNA repair and recombination proteins [BR:
sova03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SOV_23620 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
Motif
Other DBs
NCBI-ProteinID:
WWV71056
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All DBs
Position
2355226..2356089
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AA seq
287 aa
AA seq
DB search
MFAQFGPAGNPDAFYESGHKASADMPEWLAGQELKAYEYQCSRGVTIKQPTAELVGQKAA
QYGTKLSIHAPYYISLATEDETTASNTQRHFLRSLEVAKWMGADRIVFHIGGPGKGADRR
QAMERAKHLFAEVLEQAENQGLTGPQLLAETMGKQNQLGSLEEVLELCKLDERVRPAVDF
GHMHAVTGGLYTTSEEFAAVFEKIGEALGDEAAKNLHIHFSPIEFTRAGEKRHWSFGDPY
GPPYEPLLTVIANQGYTPRIICESAGTQAKDAKTMQDYYLAMVKKDF
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacaatttggaccggcaggaaatccagatgcgttttatgaatctggacataag
gcttcggccgacatgccggaatggttagcaggccaggaacttaaggcctatgagtatcaa
tgcagtcgtggggttactatcaagcagcctacggctgaattggtgggacagaaggccgct
caatatggcactaagcttagtattcatgcgccgtattatattagtctggctactgaagat
gagactactgcaagtaacacgcagcggcactttttgcgatcactggaagtagccaaatgg
atgggagccgaccggattgtgtttcatattggcggccccggtaaaggtgctgaccggcgt
caggctatggaacgggccaagcatttgtttgccgaggttctagagcaagctgaaaatcag
ggcttgacaggcccgcaactgttggcagaaactatgggtaaacaaaatcaactggggtca
ctggaagaagtacttgagctatgtaagctggatgagcgggtccggccggcagttgatttt
ggtcatatgcatgctgtgacaggtggtctatacacgacaagtgaagagtttgccgctgta
tttgaaaaaataggcgaagcactgggggacgaggcggcaaaaaatttgcatatccatttc
agccctattgagtttaccagggcaggcgaaaaacggcattggagttttggcgatccttat
gggccgccatatgaaccgttattaactgtcatcgctaatcaggggtataccccccggatt
atttgcgagtcagcaggtacccaggctaaagatgccaaaacgatgcaggattattatttg
gcaatggtgaagaaggatttttag
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