Sporomusa ovata: SOV_24410
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Entry
SOV_24410 CDS
T10406
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sova Sporomusa ovata
Pathway
sova03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOV_24410 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sova03400
]
SOV_24410 (mutM)
Enzymes [BR:
sova01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SOV_24410 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SOV_24410 (mutM)
DNA repair and recombination proteins [BR:
sova03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SOV_24410 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Zn_ribbon_ACC
Motif
Other DBs
NCBI-ProteinID:
WWV71134
LinkDB
All DBs
Position
2448229..2449053
Genome browser
AA seq
274 aa
AA seq
DB search
MPEMPEVETIRRTLADKVAGRKIIRVDIGLPRLVKWPTAAEFQAVLTDRTITKLVRRGKY
LLFYLDNNYVLIIHLRMTGRLYYKTPGSEFDKFTHILFKLDNGDILLYADTRTLGTLYLM
PEEELWRIAGLASMGPEPLSAEFTLEYFADMLSKRRAKIKTVLLNQKLIGGLGNIYVDEA
LAIACIDPERIASSLTAQEANYLHQAINQVIAAGIAHGGTTFRDYRDGAGQSGSHQRYLQ
VYGRTNEPCQRCGGIIARKEVAGRGTHYCPNCQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaatgccggaagtcgaaacaattcgccggacacttgcagacaaggtagcgggc
cgcaagattattcgtgtggatattggtctgccccgcctggtaaaatggccgacagcagct
gaattccaggctgttcttacagatagaacgattacgaagttagtgcgccgcggcaagtat
ctgcttttttatcttgataacaattatgtactcattattcatttacggatgaccggacgt
ttgtattataaaacgccaggcagcgagtttgataagtttactcatattttatttaagctt
gataatggtgacattttgttatatgctgatacgcgtacgctgggaacactttatctgatg
ccggaggaggaattatggcgtattgccggcctggcctctatgggaccggagccgttgtca
gcagaatttaccttggaatattttgctgacatgctaagtaaacgccgggctaagataaag
acggtgctgcttaatcagaagttgattggcggtcttggtaatatttatgttgatgaagcc
ctggccattgcctgcattgatccggaacgtatagcaagcagccttactgcgcaagaggca
aactacctccatcaggcgattaatcaggttattgctgccggcatagcgcatggcggcact
accttccgtgattatcgcgacggcgccggccagagcggcagccaccagcggtatctgcag
gtttatggacgaaccaacgagccttgtcagcgctgcggcggtattattgcccgcaaggaa
gtggctggccgtggtacgcattattgtcctaactgccagaagtag
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