Sporomusa ovata: SOV_24500
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Entry
SOV_24500 CDS
T10406
Symbol
dacB_2
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacB precursor
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sova Sporomusa ovata
Pathway
sova00550
Peptidoglycan biosynthesis
sova01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SOV_24500 (dacB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sova01002
]
SOV_24500 (dacB_2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sova01011
]
SOV_24500 (dacB_2)
Enzymes [BR:
sova01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SOV_24500 (dacB_2)
Peptidases and inhibitors [BR:
sova01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SOV_24500 (dacB_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
sova01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SOV_24500 (dacB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WWV71141
LinkDB
All DBs
Position
2454118..2455266
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AA seq
382 aa
AA seq
DB search
MRQLTNLGILLVIGLVFLPITVFAGDFVPELTAKAAIVMEASTGKVLYSKNANERRYPAS
TTKIITLITALEYGNLDDNVIASPNAATTEGSSLWLSPGEQLKLRDMLYGIMLVSGNDAT
VAVAEHISGSVEGFAKLMTEKAHAIGAVNSNFVNTSGLPDERHYTTAYDLAKITAYGYKN
PLFTQIVSTKNKIIPWPGKDHDRDLYNENRMLWLYDGANGVKTGYTDAAGRCLVSAANRN
GIQIVAIVLDSERMWDDSIKLLDYGFAQLKPVSVITKGDILKTVKIKEGKASNIKLLAAN
DIILPIADNEHDKFTTVVEAPTKITAPIAVGQKLGTVKIMYNNIEVANTDLIADQPVEKK
SFFTMFWGSLVSFVTFVIQNFA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaactaactaatcttggaatactgctagttataggcctggtgtttttgccaata
acagtattcgcaggagattttgtaccagaacttacggctaaagcagccatcgtcatggaa
gcgtcaacaggaaaagtgctttatagcaaaaatgccaacgaacggcgttatccggccagt
actaccaagattattacattaattaccgcactggagtatggcaatcttgatgataatgta
attgccagtcctaatgctgctaccaccgaaggctcatcactatggctttcacctggagaa
caacttaaactacgtgacatgttgtatggtataatgcttgtttctggtaatgatgctacc
gtagccgtagctgaacatatttccggatcggtcgaaggcttcgctaaactaatgactgaa
aaagcgcatgcgattggtgcagtcaacagcaactttgtaaataccagcggactacctgat
gaaagacattacaccactgcctatgatttagctaaaattactgcatatggctataagaat
ccgctatttactcaaatcgtttctactaagaacaaaatcattccctggccaggcaaagac
catgatcgggatttatacaacgaaaatagaatgctatggttatatgatggggcaaatggg
gtaaaaaccggttatactgacgcagcgggacgctgcctggtttcagctgccaatcgaaat
ggtatccaaatcgttgcgatcgtactagatagtgaacgcatgtgggatgattcgatcaag
cttttggattatggctttgcgcagcttaaaccagtttctgtcattactaaaggtgatatc
ttaaaaactgttaaaatcaaagagggaaaagcaagcaatatcaagttactggcagccaat
gatatcatcttaccgatagcagacaatgaacacgacaaatttaccactgttgtcgaagct
cccaccaaaattacggcgcctattgctgttggtcaaaaacttggtacagttaaaattatg
tataataacatagaggtcgccaatacagatttaattgctgatcagccggtagaaaaaaaa
tcatttttcaccatgttttggggatcacttgttagtttcgtaacatttgtaattcaaaac
tttgcttga
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