Sporomusa ovata: SOV_39980
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Entry
SOV_39980 CDS
T10406
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sova Sporomusa ovata
Pathway
sova03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SOV_39980 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sova03400
]
SOV_39980 (recD2)
Enzymes [BR:
sova01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SOV_39980 (recD2)
DNA repair and recombination proteins [BR:
sova03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SOV_39980 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
PhoH
HHH_2
AAA_22
AAA_28
nSTAND3
NTPase_1
PIF1
T2SSE
Helicase_RecD
AAA
AAA_16
HHH_3
AAA_5
TsaE
UvrD_C
TrwB_AAD_bind
DEAD
CbiA
SRP54
NPHP3_N
DUF815
ABC_tran
MobB
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
WWV72588
LinkDB
All DBs
Position
complement(4078998..4081223)
Genome browser
AA seq
741 aa
AA seq
DB search
MLLRIKEQELMFGYILCIGSRIVENKLEGIVENITFQATDGSFTVFRLKPGSESGIVAVT
GNFPPPLVGEQVTLTGEWVEHARYGRQFKAVSCRRIAPTSEKGIERFLASGAIKGIGPAM
ADRLVRHFGLRTLEIIELSPHRLTEVEGIGSKKVEQIRKSFAEQSELKEVMLYLEMHGVS
GAYAARIFACYGSDSVAIVEADPYRLAEEVKGIGFRIADQIAMAVGFDRGHPSRLAAGVQ
FALLMTGQTGHCCVPAETLTAETAKLLYLDAAEIASVVSEQIRLGKLYTEDFHGMTLVYP
RYLYRAEKQVAERLLRLKDKAKPIDDIDSQMLVNAWEASAGVTLAVAQRDALAAALTYGV
LVLTGGPGTGKTTTVKGILALLEQQGFKIVLGAPTGRAAKRLAETTGREAATIHRLLEAG
GGMEEDPLFGRGEDNPLDADVVIVDETSMMDMVLMSCFLQAVSDGCRVVLVGDVDQLPAV
GPGSVLKDIIRSTAIPVVRLTEVFRQAGESMIVLNAHRINRGRLPEYGSLDFQFRELDGS
EAAAQAIVELCQNELVQEGFDSQRDVQVLSPMHRQPCGVENLNRLLQAALNPPVDGKDYL
QGVNQVLREGDKVMQIRNNYTKRVFNGDIGYILAIADGKVLVRYPEEDVVYDKGEYDELT
LAYAMSVHKSQGSEYPVVVMPLTPGHHIMLQRNLLYTAVTRAKERVILLGTRAALNTAVM
SDRTRRRYSLLAERLRGESLC
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
gtgttgctgcgaataaaggaacaggaacttatgtttggatatatcctgtgtattgggagt
agaatagtggagaataaactagaaggaattgttgaaaatataacatttcaggccacagat
ggcagtttcacggtatttcgtcttaagcctggcagtgaaagcggcatagtggctgtaacc
ggcaattttccaccccctttagttggcgaacaagttacgttaactggggaatgggtggag
catgcccgctatgggcggcagtttaaggctgtcagctgccgtcgtattgcgccaacctcg
gagaaggggattgaacgttttttggcttctggggccattaaaggaattggtccggctatg
gcggaccggttggtcaggcattttggtttgcgcacgctggaaattatcgagttatcgccg
caccgactgacagaagttgaggggattggcagtaagaaggtggagcagatccgcaaatcc
tttgctgagcagtctgagctcaaagaggttatgctatatctggaaatgcatggggttagc
ggcgcttacgcggcccggatttttgcctgctatggttctgattcggtagccatagtggag
gctgatccctaccgtttggccgaagaggtaaaaggcattggctttcgtattgctgaccaa
attgccatggcggtaggttttgaccggggacacccatcgcgtttggcggcaggggtacag
tttgctttgctcatgaccgggcagacaggtcattgctgtgtgccggcagaaacgctaact
gctgaaaccgccaaacttttataccttgatgccgctgagatcgctagtgttgtcagtgag
caaatccggttaggcaagctatatacggaagattttcacggtatgaccttagtttatccc
cgctatttgtaccgggccgaaaagcaggtcgccgaacggctgctcaggctcaaggacaag
gccaagcctattgacgatatcgacagccagatgcttgttaatgcttgggaggcgtcggcg
ggtgttaccctggcagtggcgcagcgtgatgctttagcggcggcactgacttatggtgtg
ctggtgctgaccggtggccccggaacaggcaagacgacgactgtaaaaggaattttggcc
ttactggaacagcagggttttaaaattgtgctaggtgcgcctaccggtcgggcagccaaa
cggctggctgagacaacagggcgggaggccgcgactattcatcgattgttggaagccggg
ggcggtatggaggaggaccccctgtttggcaggggtgaagataatccgttggatgccgat
gttgttattgttgatgaaacctcgatgatggatatggtgttgatgagttgttttctgcag
gctgtgtcggacggatgccgggtggtgctggtcggtgatgttgatcagctgccggcagtc
ggcccaggctcagtgttgaaggatattatccgctcaactgccattccggtagttcggctg
accgaagtattccgtcaggccggcgaaagcatgattgtgcttaacgcccaccggatcaac
cggggacgcttacccgaatatggcagccttgattttcaatttcgcgaactggacggcagt
gaggcggcagctcaggccattgttgagctatgtcaaaatgagttggtgcaagaaggcttt
gacagccagcgcgatgttcaggtattatcccctatgcaccgccagccgtgcggagtcgag
aatctaaaccggttgctgcaggcggctctcaatcctccggttgatggcaaggattacctg
cagggtgtcaatcaggtgttacgcgaaggcgataaggtgatgcaaattcgcaacaactat
accaagcgggtctttaacggtgatattggttatattctggctattgctgatggcaaagtg
cttgttcgttaccctgaagaggatgttgtgtatgataaaggcgagtatgacgaactgacg
ctggcctatgcgatgagcgttcacaaaagccagggtagtgagtaccctgttgtcgttatg
ccgcttactcctggccatcatatcatgctgcagcgcaatttgctgtacacagcggtaacc
agggctaaagaacgcgtcattttgctaggaacgcgtgctgcgctcaatacggcagtcatg
agtgaccgaacccgcagacgctattcgctgctggcagaacgtttgcggggcgagagtcta
tgttaa
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