Sporomusa ovata: SOV_40370
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Entry
SOV_40370 CDS
T10406
Symbol
rfbB_1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sova Sporomusa ovata
Pathway
sova00521
Streptomycin biosynthesis
sova00523
Polyketide sugar unit biosynthesis
sova00525
Acarbose and validamycin biosynthesis
sova00541
Biosynthesis of various nucleotide sugars
sova01055
Biosynthesis of vancomycin group antibiotics
sova01100
Metabolic pathways
sova01110
Biosynthesis of secondary metabolites
sova01250
Biosynthesis of nucleotide sugars
Module
sova_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SOV_40370 (rfbB_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SOV_40370 (rfbB_1)
01055 Biosynthesis of vancomycin group antibiotics
SOV_40370 (rfbB_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SOV_40370 (rfbB_1)
00525 Acarbose and validamycin biosynthesis
SOV_40370 (rfbB_1)
Enzymes [BR:
sova01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SOV_40370 (rfbB_1)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
WWV72627
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All DBs
Position
complement(4115690..4116769)
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AA seq
359 aa
AA seq
DB search
MQTILVTGGAGFIGSNFIHIASKNPNIRLINLDNLTYAGNLDSLKDIDHDSRYTFIQGDI
CDSDLVNDSFAQYQPDSIVHFAAESHVDRSIDGPGEFIRTNIQGTFTLLEGARKYWRELG
EEKQDKFRFLHISTDEVYGSLGASGFFTEETAYAPNSPYSASKASSDHLVRAYHHTYGLP
VLMSNCSNNYGPYQFPEKLIPLMILNALEGKALPIYGNGQNVRDWLYVEDHCQAILRVLE
AGKPGEKYNIGGHNEKKNLDIVHTLCNILDEKKPRSDGKSYREQITYVKDRPGHDMRYAI
DASKIQKELGWVPAETFETGIVKTVEWYLNNLEWCRRVTDGSYRRERLGLVARGAGHGV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccattcttgtcaccggcggtgccggttttattggcagtaactttatccatatt
gcatcaaagaaccctaatattcgtcttattaacctggacaatctaacttatgcgggaaat
ctggattcgcttaaggatatagatcatgattcccgctatacctttatccaaggggatatt
tgcgatagtgatttggtaaatgatagttttgctcaatatcagcctgacagtatcgttcat
tttgcggctgagtctcatgtggatcggtcgattgacggaccgggggaatttattcgtacc
aatattcagggaacctttactctattagaaggagcacgaaagtattggcgggaactgggt
gaagagaaacaagataagttccgttttttacatatttccactgatgaggtctatggttcg
ttaggagctagcggtttttttaccgaagaaacagcttatgctccgaattccccatactcc
gcatccaaggcatcatcggatcatctggtacgggcctatcatcatacgtatgggctgccg
gtactaatgtccaattgttctaacaactatggcccatatcagtttccggaaaagctgata
cctttaatgattttgaatgccttagaaggcaaggcattacctatatacggtaatggccaa
aacgtgcgggactggctgtatgtggaagaccattgccaggccatccttagggttttggaa
gcgggaaaacctggtgaaaagtataatattggcggacataatgaaaagaaaaaccttgat
attgttcatacattgtgtaatatcttagatgagaaaaagcctcgcagtgacggtaagtcc
taccgggagcagattacctatgtaaaagaccgtcccggtcatgacatgcgctatgcgatt
gatgcgtctaagattcaaaaagagttgggctgggtacctgctgagacctttgaaaccggg
attgtcaaaacggtggaatggtatctgaacaatttggaatggtgtagaagggtgacggat
gggagttataggcgggagagattggggctcgtggcacggggcgcagggcacggggtgtaa
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