Sporomusa ovata: SOV_43000
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Entry
SOV_43000 CDS
T10406
Symbol
pdxS
Name
(GenBank) Pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
sova Sporomusa ovata
Pathway
sova00750
Vitamin B6 metabolism
sova01100
Metabolic pathways
sova01240
Biosynthesis of cofactors
Module
sova_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
SOV_43000 (pdxS)
Enzymes [BR:
sova01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
SOV_43000 (pdxS)
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Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
Dus
TetR_C_27
IGPS
FMN_dh
NanE
OMPdecase
NMO
Motif
Other DBs
NCBI-ProteinID:
WWV72890
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Position
4398905..4399783
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AA seq
292 aa
AA seq
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MQNQYQLNKNLAQMLKGGVIMDVTNAEQAKIAETAGAVAVMALERVPADIRKDGGVARMS
DPKMIREIKATVTIPVMAKARIGHFVEAQILEALGIDYVDESEVLTPADESYHINKRDFK
IPFVCGARNLGEALRRIGEGAAMIRTKGEAGTGNVVEAVRHMRTMLADMRRVKAAPPEEL
MSIAKEMGAPFDLIEYIWKHGKLPVVNFAAGGIATPADAALMMQLGCDGVFVGSGIFKSG
DPAKRAKAIVEATTHYNDPELLANISENLGEPMVGIEMDKLEPAERLAGRGW
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccaatatcaacttaacaaaaatttagcccaaatgctaaaaggcggcgtcatt
atggatgttaccaatgcggagcaggcaaaaattgctgaaacagccggagccgtcgctgtt
atggcactggaaagagtaccggccgacattcgaaaagatggcggcgtagcccggatgtct
gatccgaaaatgattcgtgaaattaaagccactgttacaataccagtcatggctaaagca
agaattggccattttgttgaagcccaaattcttgaagctctgggtattgactatgttgac
gaaagtgaagtcttaaccccggctgatgagtcctatcacattaataaacgcgatttcaaa
atcccctttgtctgcggtgcccgcaaccttggcgaagccttacgccgtattggtgaaggt
gccgctatgatccgcaccaagggagaagccggcacaggtaatgtggtcgaggccgtccgg
catatgcgtacaatgctggccgatatgcgccgggtaaaagcagcaccgccagaagaacta
atgagcattgctaaggaaatgggcgccccctttgaccttattgagtatatctggaaacat
ggtaaattgcctgttgttaacttcgctgccggcggtattgccacgccggcagacgccgcc
ctcatgatgcagctgggctgcgatggtgtatttgtcggttcaggtattttcaaatcaggc
gatcctgccaaacgcgccaaagccattgtcgaagctactactcactacaatgaccctgag
ttattagccaatatctctgaaaatctaggcgaacccatggtcggcattgaaatggataaa
cttgaaccagccgaacgtttggctggcagagggtggtag
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