Sporomusa ovata: SOV_44420
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Entry
SOV_44420 CDS
T10406
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sova Sporomusa ovata
Pathway
sova03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOV_44420 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sova03400
]
SOV_44420 (exoA)
Enzymes [BR:
sova01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SOV_44420 (exoA)
DNA repair and recombination proteins [BR:
sova03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SOV_44420 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WWV73032
LinkDB
All DBs
Position
4543641..4544393
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AA seq
250 aa
AA seq
DB search
MKLISWNVNGLRACINKGFYDFFVNVDADIFCVQETKMQQEQSELVLPGYHEYWNSAIKK
GYSGTVIFTRIKPLAVTYGMNIIEHDQEGRMITLEFADFQLVNVYAPNSQRELARLNYRM
KWEDDFNTYLTQLDKDKPVIICGDLNVAHQEIDIKNPKTNRKNAGFTDEERNKMTLLLQA
GFTDSFRALYPDKQDAYSWWSYMMNARARNIGWRIDYFLVSKRLTTSIKEASIYADIMGS
DHCPVGLELV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgatctcgtggaatgtcaatggactacgggcttgtatcaataaaggattttac
gatttttttgtaaatgtggatgccgatattttttgtgtccaggaaactaagatgcaacag
gaacaatctgaattggtgctgccaggttatcacgaatattggaacagcgccataaaaaag
ggctactctggtactgttatttttacgcggatcaaacccttagctgttacctatggcatg
aatatcatcgaacatgatcaggaaggacgaatgattaccctggaatttgctgattttcag
ctggttaatgtttatgctcccaattcccagcgagaacttgcccgcctcaactaccgcatg
aaatgggaggatgatttcaatacttaccttacacagcttgacaaagataaaccggtaatt
atttgcggcgacctcaatgttgcccatcaggaaatcgacattaagaatccgaaaaccaac
cgcaagaatgccggttttactgatgaagaacgaaataaaatgacactgctgctccaggca
ggctttactgattcctttcgcgctttatacccggataagcaggacgcctacagctggtgg
tcttatatgatgaatgccagagcgcgaaatatcggctggcgtattgattattttttagtg
tctaaacggctaacaacctctatcaaagaagccagtatctatgctgacatcatgggcagt
gatcattgtccggttggtcttgagttagtataa
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