Sporomusa ovata: SOV_44850
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Entry
SOV_44850 CDS
T10406
Symbol
spoVD_5
Name
(GenBank) Stage V sporulation protein D
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sova Sporomusa ovata
Pathway
sova00550
Peptidoglycan biosynthesis
sova01100
Metabolic pathways
sova01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SOV_44850 (spoVD_5)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SOV_44850 (spoVD_5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sova01011
]
SOV_44850 (spoVD_5)
Enzymes [BR:
sova01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SOV_44850 (spoVD_5)
Peptidoglycan biosynthesis and degradation proteins [BR:
sova01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SOV_44850 (spoVD_5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Ubiquitin_2
DUF4660
Motif
Other DBs
NCBI-ProteinID:
WWV73075
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All DBs
Position
complement(4587662..4589455)
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AA seq
597 aa
AA seq
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MDEVMSKRLNIMQWVVVFIVVALISRLGYLQVIQGQNYARLADGNRIRIIPIAAPRGIFY
DRNGIPLVSKRPSFAVTVTTFSHSIQDSVITNLSKTLDMKVEEIRAKINRHTGFSFAPVR
LKSDVDPETIIKIEENRSEFPEVVIKVQPVRKYIYQDFAAHVFGYVGEISEAELKKKKAE
GYKAGDIVGKFGLEKVYDKYIRGRVGAERIEVDANGQPIQVLDERQPIPGNNLILTLDYS
IQRAAEKAIDERLRYLQSKQHRLKAKAAAAVVMNPKTGEILAMVSRPAFNPNLFNGGISE
KDWDLLIGNPFNPLENRAISGEYPPGSVFKIITGTVALELGKVTTEEKILDTGKHWLIPK
GNAGGEALGWIDFKEALSKSDNVYFYEMGNRVGIDNLEKYARLYGLGVTTGIELQGEAKG
LVANRRYKEEMYEDGWYLSETFDAAIGQGFQLVTPLQMAMVMGEVANGGYRYRPFLVSKI
LSPAGKTIEEFLPEQTGRITISSPTLAVIRNALHEVALPGGTAAHTFQGFPVSIAGKTGT
AENPQGDDHGWFVAYAPFEDPQVVVAVLVEHGGYGSQSAAPIAKDILAAVFHVQQSI
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtggatgaagttatgtcgaagcgtttgaatatcatgcaatgggttgttgtttttatagtc
gttgctcttattagccggttaggttatttgcaggtcatacaaggacagaattacgcgcgg
ctggccgatggtaatcgcattcgtattatacccattgcagctccgcggggtattttctat
gaccgcaacggtataccactggtttctaaacgtcctagctttgcagttacggtaacgacc
ttttcccattctatacaggattctgtgattactaatttgagcaagactttagatatgaaa
gtggaggaaatccgagcaaaaataaatcggcatactggattttcttttgcgccggttcgg
ctaaagtcggatgtggacccagagactataattaaaattgaagaaaatcgcagcgaattt
ccagaggtggtgattaaggtccaaccggtacgaaagtatatttatcaggattttgctgca
catgtttttggctatgtcggtgagattagcgaggcggaattaaaaaagaaaaaagcagag
ggctataaagccggtgatattgtaggaaaatttggtttagaaaaggtgtatgacaaatat
attcgggggagggttggcgctgaacggatagaagtggatgctaatgggcagccgattcaa
gtactggatgagagacaaccgatacctggcaataatttaatactgacgcttgattattcc
attcagcgggctgcagaaaaggcaattgatgaaaggctgcgttatttgcagtcaaagcag
cataggctaaaagcgaaagcagcggcagcggtggttatgaatccgaagaccggcgagatt
ttagcaatggtaagccggcctgcttttaatccaaatttatttaatggcggtatttctgaa
aaagattgggatttgcttattggcaatccgtttaatccgctggaaaatcgggccatttcc
ggtgaatatccgccaggatccgtttttaaaattattacgggaacggtagcgttggagtta
ggaaaagttacaacggaagaaaagatattggatactggcaagcactggctaattcctaaa
ggcaatgccggaggggaagccttgggatggattgattttaaagaagcgttatccaaatcg
gataatgtctatttttatgaaatgggcaatcgggttggaattgataatctggaaaaatat
gcacggctgtatggattaggggtcactactggcatcgaattgcagggagaagcaaagggt
ttggtagcaaatcggcgctacaaggaagaaatgtatgaggatggatggtatctatcggaa
acttttgacgccgctattggtcaagggtttcaattggtgacgccgcttcaaatggcgatg
gtcatgggtgaggtcgccaacggcggctaccgttaccggccttttttggtcagtaaaatt
ctctcgcctgctggtaaaacgatcgaggagtttttgccggagcagacaggtcggataaca
atatccagtccgacgcttgcggtcattcgtaatgctttacatgaggtagcgttgcctggc
ggcaccgctgctcacacttttcaggggttccccgtttctatcgctggtaagacaggaact
gcggagaatccgcagggtgatgatcatggctggtttgtagcttatgcaccatttgaagac
ccgcaggttgtggtggcggtgcttgtggaacatggcgggtatggttcgcaatcagcggct
ccgattgccaaagatattttagcggcggtttttcatgtccaacaatctatctaa
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