Sporomusa ovata: SOV_47270
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Entry
SOV_47270 CDS
T10406
Symbol
rocR_2
Name
(GenBank) Arginine utilization regulatory protein RocR
KO
K06714
arginine utilization regulatory protein
Organism
sova Sporomusa ovata
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sova03000
]
SOV_47270 (rocR_2)
Transcription factors [BR:
sova03000
]
Prokaryotic type
Helix-turn-helix
Other families
SOV_47270 (rocR_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA
AAA_5
AAA_2
PAS_9
PAS
PAS_4
Mg_chelatase
HTH_30
I-TevI_DNA-bd
HTH_10
AAA_16
ATPase
PAS_8
Motif
Other DBs
NCBI-ProteinID:
WWV73311
LinkDB
All DBs
Position
4850440..4851888
Genome browser
AA seq
482 aa
AA seq
DB search
MIEKSQKSLEDLIRENQLLHEIIDAISEGVYAADKDGTILIYNRAFERIEVTDRHTMLGK
KDTDVYSVAPLSNLQRIAVLQSKKPILEQYMTYQLYTGKKVDIVYNSYPFFENGELTAVY
SINRDLPTINELLTNVVKCFGRNKSKNRLNGTIYSLDDIIGSSPLIKQALKRARKIAPMP
STVMIYGETGTGKELFAQGIHNASCYSSRPFIAVNCAALPENLMESLLMGTVKGAFSGAI
DSPGLFEQAENGTLFLDEINSLSLPLQAKLLRLLQDKMVRRLGDKKERKINCRIISATNQ
SLYEMASKSLFREDLLYRLTPVILHIAPLRERPEDIPVLVMEFVSRFNQQLSLNIKQITP
ELLELLSSYSWPGNVRELEHVIESAMSIVDHTASELSIDDLPSFLIKRMLISAKPVETPE
GAIPSGEALSEYLRHCEQSYIQRILKMKNGNVSDSAKHMGISRQDLHYRLRKLGIKSTTY
KS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaagtcacaaaaaagtctggaagacttaattagggaaaatcagttattacat
gaaattatcgatgctatatcagaaggtgtatatgccgcagataaggatggaaccatacta
atttataaccgggcttttgaaagaattgaggtcactgatcgtcatactatgcttggaaaa
aaggatacagatgtgtattccgtggcccctctgtcaaacctccagcgcatagcagtgctg
caaagcaaaaagccgatattagaacaatatatgacataccaactatataccggaaaaaag
gttgatattgtttacaattcttacccctttttcgagaatggggaactaactgcagtatat
tctattaacagggatctcccaaccataaatgagttactgaccaatgtagtaaaatgtttt
gggcgtaataaatcgaaaaaccggttaaacggcactatctatagccttgatgacattatt
ggcagcagtccgctcattaaacaggcacttaaacgagccaggaaaattgcaccaatgcca
tcaactgttatgatttatggggaaaccggtactggtaaagaactctttgcccagggaatc
cataacgcaagctgttatagctcacgtcctttcatcgccgtcaactgcgctgcattacct
gaaaacttaatggaaagcttgcttatgggaacagtaaaaggagctttctccggtgccata
gattctcccggtttgtttgaacaggccgaaaacggcactctgtttctggatgaaatcaat
tcattaagcctgcccttgcaggccaagctgctcagattactacaagataagatggtgcga
cgtctcggcgataaaaaagagcgtaaaattaactgccgtataatcagtgcaactaaccaa
agtctctacgaaatggcaagtaagagcttattccgtgaagacctcctgtatcgtttaaca
ccggtgattttacacatcgcgccactaagagagcgtccagaagacataccggtactcgtc
atggagtttgtttcccggtttaatcagcaattgagcttgaacattaagcaaataacgcca
gaactgttggaattactatcctcatacagctggccaggcaatgtccgcgagctagaacat
gtgattgaaagcgctatgagtattgttgatcatacagcttcagagttaagtattgatgat
ttgccttcttttttaataaagcgaatgctcatatcggctaagcctgtagaaacgccagaa
ggtgctattccctctggcgaagcattatccgaatatttacgccactgtgaacaatcttat
attcaaagaatattaaagatgaaaaacggcaacgtaagcgacagtgccaaacatatgggt
atctccagacaagatttgcactaccgtctgcgtaaactgggaataaaatcaactacctat
aaatcatag
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