Sporomusa ovata: SOV_48240
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Entry
SOV_48240 CDS
T10406
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sova Sporomusa ovata
Pathway
sova03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOV_48240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sova03400
]
SOV_48240
Enzymes [BR:
sova01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SOV_48240
DNA repair and recombination proteins [BR:
sova03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SOV_48240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WWV73403
LinkDB
All DBs
Position
4952369..4953040
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AA seq
223 aa
AA seq
DB search
MFSSISDLESALLSCDQCKLCQENNHGPTSYNGSACSPLAIIGEGPGGVEDEYGVPLVGP
SGQLLDKALWSVGVTRDKAYTSNVIKCRPNKNRTPTVEEGEFCASLWLDKEIAIIQPKVI
IALGSVALKYLLAPTARITKDRGHWFTTKYNIPAIATYHPAYLLRLTGKDLVKAKWEVYY
DMKAAVEKCQELAPGNDLKSETIPNLLELYNERKISRLSKNSL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttctcttctatttctgatcttgaaagtgcactattatcctgcgaccaatgtaaattg
tgtcaggaaaataatcatgggccaacatcatacaatggttctgcttgtagcccattagct
attattggcgagggacccggtggcgtcgaggatgaatatggggtgcctttagtaggacca
tccggtcaattattagataaggccttatggagcgtaggtgtaacaagagataaagcttac
acttcaaatgttataaaatgcagacctaataaaaatcgcacgccaaccgtagaggaaggt
gaattttgcgctagtctatggttagataaagaaatagcaataatccagccaaaagttatt
attgctttaggcagtgtagctctaaaatatctgctggcgcccactgctcgaattaccaaa
gaccgggggcactggtttactacaaaatataacatcccggcgattgccacttaccacccg
gcttacctcctgcgactaaccggcaaagatctggttaaggccaagtgggaggtatattat
gacatgaaagccgccgtagaaaaatgccaggaactggctcctggtaatgacttaaaatct
gaaaccattccaaacttactagaactatacaatgaacgaaaaattagcagattaagcaaa
aattccttataa
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