Sporomusa ovata: SOV_49620
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Entry
SOV_49620 CDS
T10406
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sova Sporomusa ovata
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sova03019
]
SOV_49620 (yhaM)
Messenger RNA biogenesis [BR:
sova03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SOV_49620 (yhaM)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
WWV73538
LinkDB
All DBs
Position
complement(5098881..5099840)
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AA seq
319 aa
AA seq
DB search
MTLGELVKNPKGFKVVGIYRISRFEVKTARNGKSYGDCLISDHSFEVPAKYWDISGDSAM
LFQQNGILRLEAMLDFFKDSPQLTIVGGYVPSPVEIDQALQSLGMMAPRKIDDMVSELTA
IIASIKQEGLRDLLIAIFDTNKPFAEKFKRHPGAVKNHHAYIGGLLAHTLEVAAAALDHC
NRNDKINRDILLAAALVHDIGKVREIEVDAFGMGIGFTREGKLLRHISLGMEMLEHACQE
VGLAPELGLMLKHCILSHHGQAEWGSPVEPMLLEAELLHYLDNLSAKTEQFSREAGRAEP
GGFNRSATLRREVYRPSIE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacactgggggaattagttaagaacccaaagggatttaaggtagtgggcatttaccgg
atttcgcggtttgaagttaaaacagcaagaaatggtaaatcttacggagattgcctcatt
agtgaccacagttttgaggtaccagctaagtattgggatatatctggtgatagtgcaatg
ctgtttcagcaaaatggaatactgcggctggaagcgatgttagatttttttaaagacagc
ccgcagctgacaattgttggtgggtatgtaccatcaccagtggaaattgatcaagcattg
caaagtttgggcatgatggctccccggaagattgatgatatggttagtgagttaacggct
attattgccagtatcaagcaggaagggctgcgggacttgttaatcgctatctttgatacc
aacaagccgtttgcagaaaagtttaagcgacatccaggcgctgtcaagaaccatcatgcg
tatattggcggtttgctggcacatactcttgaggtggccgcagctgccttggaccattgt
aaccgcaatgacaagataaacagggatattctcctggcggctgccttggttcatgatatt
ggcaaagtgcgagagattgaggtggatgcgtttggtatgggcataggctttaccagagag
gggaagttgttgcggcatatttcactgggtatggagatgctggaacacgcctgccaggaa
gtgggtttggcgccggaacttggattaatgcttaagcattgtattctttctcatcatgga
caggccgagtggggcagtccggtggaaccaatgttgttggaggccgagttgttgcattat
ctggataatcttagcgcgaaaaccgagcagttttcccgtgaggccgggcgggctgagcct
ggcggctttaatcgcagtgctacgctgcggcgagaggtataccggccaagtatagaataa
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