Sporomusa ovata: SOV_51320
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Entry
SOV_51320 CDS
T10406
Symbol
polC_3
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sova Sporomusa ovata
Pathway
sova03030
DNA replication
sova03430
Mismatch repair
sova03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOV_51320 (polC_3)
03430 Mismatch repair
SOV_51320 (polC_3)
03440 Homologous recombination
SOV_51320 (polC_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sova03032
]
SOV_51320 (polC_3)
03400 DNA repair and recombination proteins [BR:
sova03400
]
SOV_51320 (polC_3)
Enzymes [BR:
sova01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOV_51320 (polC_3)
DNA replication proteins [BR:
sova03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SOV_51320 (polC_3)
DNA repair and recombination proteins [BR:
sova03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SOV_51320 (polC_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SWIM
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
MYO15
Motif
Other DBs
NCBI-ProteinID:
WWV73708
LinkDB
All DBs
Position
5245224..5246222
Genome browser
AA seq
332 aa
AA seq
DB search
MNFVAIDFETANRDPASACSLGLVVVKDGVITEQKQWLIQPPNLAFDYRHIKTHGITPEM
VKDAPNLAAIWLDLKPYIDNQILLAHNAQFDINVLHNTTAVYNLELPVFKSVCTVELSRR
AWPELKNHKLSTIANTLGIALDHHNSSSDALACAKIALNACNCLNLKHITDCFDLLDMQS
TFETFEYVRDFWDEQGFEVHSTEDQIKRQKSAAKVCVESLDIENKIAVINGYDVTLCSCT
CRDYSVRRFPCKHMYRLAIELGIFEEQPTIKSKTKKNSCTLTISADQIYEQVLSDIKDDF
TCGKISKAEYDRQISRLSKIFCENSLAQKVNT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgtcgccattgattttgaaactgcaaaccgtgatcctgcaagcgcttgttcc
ctggggttagtagtagttaaagacggggtcataaccgaacaaaaacagtggctaattcaa
ccaccaaaccttgcctttgattatcgtcatattaaaacacatggtataacgccagagatg
gtaaaagatgctcctaacttagcggctatttggctagatttaaaaccttacatagacaat
caaatattgcttgcccataacgcccaatttgatattaatgtattgcacaacactactgct
gtctataatttagaacttccggtatttaaatcagtatgtactgtagaattatctcgaagg
gcttggccggaactaaaaaatcataaattatcaacgatagcaaacacattaggaattgcc
ttagatcaccataattcatcttcagatgctttagcatgcgctaaaatcgctctaaatgct
tgcaattgtttaaacttaaaacatataactgattgctttgatttattagatatgcagtca
acctttgaaacttttgaatatgttcgcgatttctgggatgaacaaggatttgaagttcac
tcaactgaagatcaaataaaaaggcaaaagagtgccgctaaggtttgtgtagaatctctt
gatattgaaaacaagatagcagtaataaatggttacgatgttactctgtgctcttgtaca
tgccgagattattcagtgcgccgttttccttgtaaacatatgtacagactcgcaatagag
ttaggtatatttgaagaacaaccaactataaaaagcaaaaccaaaaagaattcatgcacg
cttactatatcagcagaccagatatacgagcaggtcttatctgatattaaagatgatttt
acttgtggaaaaatcagcaaagcagaatatgacagacaaataagccgtctcagcaaaatt
ttctgtgagaattcattagctcaaaaggttaacacgtaa
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