Sporosarcina oncorhynchi: QWT69_02310
Help
Entry
QWT69_02310 CDS
T10260
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
sow Sporosarcina oncorhynchi
Pathway
sow03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sow00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QWT69_02310 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sow03021
]
QWT69_02310 (rpoE)
03400 DNA repair and recombination proteins [BR:
sow03400
]
QWT69_02310 (rpoE)
Transcription machinery [BR:
sow03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QWT69_02310 (rpoE)
DNA repair and recombination proteins [BR:
sow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QWT69_02310 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
BUD22
Mnd1
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
WOV87974
LinkDB
All DBs
Position
452097..452663
Genome browser
AA seq
188 aa
AA seq
DB search
MNLKELSKEELLEESWIDIAYAILTDRREPLTLKELMDEIRELTGLSEKQVKDRLPQFYT
DMNIDGRFLAINDNRWGLREWYPVDQIEEETAPVVKVRKKKKKKKAYDDDEDEDDDDDAE
EDELFDEGFDDIDDIDEEDDEDEDEDEEEVVEIDVDLVEDDDELEIIPDEELDVDDDEDE
DDEDEDEL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgaaagaattgagtaaagaagaacttcttgaagaatcttggattgatattgct
tatgctatattgacagacagacgtgaaccattgacgcttaaagaattaatggacgaaatt
cgtgaattgacaggtttgtccgaaaaacaagtgaaagacagattgccacagttttacaca
gatatgaatattgacggccgcttccttgcgatcaatgacaaccgttggggattgcgcgaa
tggtatcctgtcgatcagattgaagaagaaacagctcctgtcgtaaaagtacgcaagaag
aaaaagaagaaaaaagcgtatgatgacgatgaagatgaggacgatgacgacgacgctgaa
gaggacgagctattcgacgaaggattcgacgacattgacgacatcgacgaagaagatgac
gaagacgaagatgaagatgaggaagaagtcgtggaaattgacgtagatctagttgaagac
gacgatgagcttgaaattatccctgatgaagaacttgacgtggatgatgatgaagatgag
gacgacgaagacgaagacgagctttga
DBGET
integrated database retrieval system
