Sporosarcina oncorhynchi: QWT69_02420
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Entry
QWT69_02420 CDS
T10260
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sow Sporosarcina oncorhynchi
Pathway
sow00260
Glycine, serine and threonine metabolism
sow00460
Cyanoamino acid metabolism
sow00630
Glyoxylate and dicarboxylate metabolism
sow00670
One carbon pool by folate
sow00680
Methane metabolism
sow01100
Metabolic pathways
sow01110
Biosynthesis of secondary metabolites
sow01120
Microbial metabolism in diverse environments
sow01200
Carbon metabolism
sow01230
Biosynthesis of amino acids
sow01240
Biosynthesis of cofactors
sow04981
Folate transport and metabolism
Module
sow_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sow00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QWT69_02420 (glyA)
09102 Energy metabolism
00680 Methane metabolism
QWT69_02420 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QWT69_02420 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
QWT69_02420 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QWT69_02420 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
QWT69_02420 (glyA)
Enzymes [BR:
sow01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
QWT69_02420 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WOV87995
LinkDB
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Position
471844..473097
Genome browser
AA seq
417 aa
AA seq
DB search
MDLSNVKREDTAVYEAIMAEKNRQNANIELIASENFVTEAVMEAQGSYLTNKYAEGYPGK
RYYGGCEHVDVVENIARDRVKEIFGAAYANVQAHSGAQANMAVYFTVLEPGDTVLGMNLS
HGGHLTHGSPVNFSGVLYNFVEYGVSKEDECIDYEDVRQKALEHKPKLIVAGASAYPRAI
DFAKFREIADEVGAYLMVDMAHIAGLVAVGEHPNPVPYAHFVTSTTHKTLRGPRGGLILV
NEEFAPEFGRKIDKSIFPGIQGGPLMHVIAAKAVAFGEALKPEFKTHIQQVKKNAKALAE
SLMAEGVDIVSGGTDNHLLLINLKSLGITGKIAEHVLDEVGITVNKNTIPFDTESPFVTS
GVRIGTPAVTTRGFKEEEMKEIGSIIADLLKNHEDEATKTEAAARVKALTDKFPLYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatttgagcaatgtgaaacgtgaagatacagcagtatacgaagcgattatggcagag
aagaatcgccagaatgccaatatcgaattgattgcatccgaaaactttgtgacggaagca
gtcatggaagcacaaggatcatatttgacaaataaatatgctgaaggctatccaggtaag
cgttactacggcggttgcgaacacgtcgatgtcgttgaaaacattgcacgcgaccgggtc
aaagaaatctttggcgcagcgtatgcaaacgttcaagcgcactccggtgcacaagcaaac
atggcagtctatttcacagttcttgagccaggcgatacagttctcggtatgaatctttct
cacggcggacacttgacgcacggtagcccggtgaacttctcgggagttctttacaacttt
gttgagtacggtgtaagcaaagaagacgaatgcatcgattacgaagatgtccgtcaaaaa
gcgcttgagcataagccgaagctaatcgttgcgggagcaagtgcatatcctcgcgcaatc
gacttcgcgaagttccgtgaaatcgcggatgaagtcggtgcatacttgatggtggatatg
gctcatattgctggacttgtcgctgttggcgagcatccaaatccagttccatacgctcat
tttgttacatcaacgacacataagacgttgcgcggtccacgtggcggcctcattcttgtc
aacgaagaattcgcacctgaattcggtcgtaaaatcgacaagtcgatcttcccaggtatc
cagggtggtccgttgatgcacgtgatcgcggcaaaagcggttgcattcggcgaagcattg
aaacctgaatttaaaacgcatatccaacaagtgaagaagaacgcgaaagcacttgcagaa
agtttgatggcagaaggtgttgatatcgtttcaggcggaacggacaatcacttgttgctc
atcaacttgaagtcacttggcatcacaggcaaaatcgcagaacacgtccttgacgaagtc
ggcatcacagtgaacaaaaacacaattccattcgacacggaaagcccattcgtcacttca
ggcgtccgtatcggaacacctgccgtcacaacacgcggcttcaaagaagaagaaatgaag
gaaatcggttccatcatcgctgaccttctgaaaaaccacgaagacgaagcaacgaaaaca
gaagcagcagcacgtgttaaagcattgacagataagtttcctttatatgcttga
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