Sporosarcina oncorhynchi: QWT69_04605
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Entry
QWT69_04605 CDS
T10260
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sow Sporosarcina oncorhynchi
Brite
Enzymes [BR:
sow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QWT69_04605 (addB)
DNA repair and recombination proteins [BR:
sow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QWT69_04605 (addB)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WOV88409
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Position
991985..995479
Genome browser
AA seq
1164 aa
AA seq
DB search
MSLRFITGRAGTGKTTMIEREIAAELERDPLGEAIILIVPDQMSYSMEHSLSVKFGLNGM
IRAQVSTFKRLAWRVLQETGGITRKEVDGFGYRMLVRSVLEENRDELKLFRQAADKRGFT
ERIGDLMKEFSRYCLDTPTLTLLQDSLSKGNAPRTLQDKVSDLVLLVSKIEEKLGTTYVD
SEGHLALLASQIKHAELIERAEIYIDGFESFTAREYEIITELMKHGNRVTVVLPMESDLS
GHADHELFFNAVRSSMKLREIAREESIEIEEQIHLEEALRFTNAELRHFEREFENYPPVE
HASEGAVTLIEATDRRAEVHAVARHIRKLVMDGHRYKGLSILYRQPDVYDELIETIFSQY
DIPVFISRKKPMLHHPLIEFTRSILEVVTSGWSYESVFRAVKTDLFFPHGEDKLIWRERA
DRLENYVLANGIHGNRWQDDDRWKVKRYRGLELHTNVQTDEELQMEQELHLIRDVVREPL
SAFAAQLKSAKTGRQKAEALFTFMESLHVFEKIIDLRAEEERAGKMLSATEHDQAWNSWV
NVLDQFVLMFGDKEIALKEAARILDEGLDTLEFTRIPPSLDQVTVTTIELSSLMDIDVVF
VIGVNDGVLPQRIDAEGILSDSDREWFTMNGIELAPSSKTKLMDESYMAYRAFTSAREKL
FISYPGADEEGKSLLPSLYIPRVQQLLSGVAIHTAVTDPSELLDEDEQADYIIHPRTALP
YIATKVKEAEQTGGIESAEWLAVLNYYEEDPLWSSVLRYITRSMHAGNKTERLAPQLTEG
LYGKTFVSSVSRVESYYSCPFQHFASYGLGLQERMEYTLEAPSIGDLFHAALKWISDEVN
RTGISWSELSKAQCWQLARDAMDYITPMFFNRILLSTQRYHYIRRKLTHILTRTIFALGK
QATTSLFKPIAIEAAFGPGEQLPPLEIPLRRGNQMNLRGRIDRVDATEIDGKKYLRIVDY
KSSAQQLDLTDVYYGISLQMLTYLDVAVEHAEEWIGFKADPAGVLYLHIHNPMIRTEIEL
TEELIEQEILKSYKMRGYLLDDPEVVTGMDAQIGKTSSVIPASFKTDGSFTKASKVLSTE
DLHTVRKFVRHRHQQAGDGMLAGDTRVYPYKLKDKMPCQFCSYRSVCQFDPTDPDQAYRQ
YESMDSEQSLEKMRKDVTDDGHSS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgcgtttcattaccggcagggccggaacagggaagacgacgatgattgaacgg
gagattgcggctgagcttgagcgtgatccgctcggggaagcaatcattctaattgtgccg
gaccagatgtcctattctatggagcatagtttgtccgtcaaattcgggttgaacgggatg
attcgtgcacaagtgtcgacgtttaaacggcttgcgtggcgcgtgttgcaggaaacgggt
ggcattacacgcaaggaggtcgacgggttcggctatcgtatgcttgtccggagtgtgctg
gaagaaaatcgggatgagttgaagttgtttcgtcaagcagcagataagcgtgggttcacc
gagagaatcggcgatctgatgaaggagttcagcagatactgtctggacacgccaacactt
acgcttcttcaagatagtctgtcaaaagggaatgctccgcgcactttgcaagacaaagta
agtgatctagtgttgcttgtcagtaaaatagaagaaaaactcgggactacttacgtagat
agtgaagggcatctcgcgttattggcttcgcagattaaacacgcagagctgattgaaaga
gctgagatttatatcgacggattcgaaagctttacggcgcgtgaatatgagatcattaca
gaattgatgaagcatggcaaccgggtgaccgttgtgctgccgatggaatccgatttgtcg
ggacacgccgatcacgaactgtttttcaatgccgtacggtcttccatgaaactgcgggaa
atcgcacgggaagagtcgattgaaatcgaagagcaaattcatcttgaagaagcgttgcga
ttcacaaacgccgagcttcgtcatttcgagcgagaattcgagaattatccgcctgttgag
catgcatctgaaggagcggtcacacttatcgaagcgacggaccgtcgtgcagaagtgcac
gcggtagcacggcatatccgcaaacttgtgatggacgggcatcgttataaaggattgtcg
attttgtatcgtcaacctgacgtgtatgacgaactgatcgaaacaattttttctcagtat
gatatacctgtctttattagccgaaaaaaaccgatgttgcatcatccacttatcgaattc
acacgatctatattggaagtcgtaacgtcaggctggtcttatgagtccgtgtttcgagcg
gtgaagacggatctcttctttcctcatggggaagacaagctaatttggcgggagcgtgcg
gacaggctcgagaattatgtactggcaaacggtattcacggcaaccgttggcaagatgac
gacagatggaaagtgaagagatatcgcgggttggaactgcatacgaatgtgcagaccgat
gaggaattgcaaatggagcaggaattgcatctcatccgtgatgttgtgcgtgaaccactt
tcagcgtttgccgctcagctgaaaagcgcaaagacaggacgacaaaaagcagaagcgctg
tttacgtttatggagtctttgcacgttttcgaaaagattatcgatttacgggcggaggag
gagcgcgcggggaaaatgctaagcgcgacggagcatgatcaggcatggaattcgtgggtc
aatgtgctcgaccagtttgtgctcatgttcggtgacaaagaaatagcacttaaagaagcg
gcgagaattttagatgaaggattggatacgcttgaattcacacgaattccaccttcattg
gatcaggtgacggtgacgacgattgaactttccagcttgatggatatcgatgtcgttttc
gttatcggcgtaaatgacggcgtgttgccccaacggatcgatgcggaaggaatcctatcc
gattcggacagggaatggttcacgatgaatgggatcgaattggccccttcatctaaaacg
aagttgatggatgaatcttatatggcatacagggcattcacatcagcacgggaaaagctg
ttcatctcgtatcctggagcggacgaagaaggaaagtcgctgttgccgtccctttatatc
ccacgggttcagcaattgctctccggagtggcaatccacacagccgtcacagacccgtcg
gaactgctagatgaagacgaacaggctgattatattattcatccgcgaacagcactgcct
tatatcgctacgaaagtgaaagaagctgaacaaacgggcggtatcgagtctgccgaatgg
cttgcggtgctgaactattacgaggaggatccgctttggtcatcagtacttcgttatatt
acccgctcgatgcatgctggcaataaaaccgaacggctcgctccgcagctgacagaaggt
ttatatgggaaaacattcgtttcaagtgtgtcacgtgtcgaatcctattacagctgtccg
ttccagcattttgcgtcttatggactggggttacaagaacgaatggaatatacactcgaa
gcaccgtcgatcggtgatctgttccatgcggcattgaaatggatttcagatgaagtcaac
aggacaggcatttcatggtcagagttatcgaaagcgcaatgctggcaactggcaagagac
gcgatggattatattacaccaatgtttttcaaccggattcttctgtcgacgcaacgctac
cattacattaggcggaagttgacgcatattttgacgcggacgattttcgcgcttggtaag
caagcgacgacaagtctctttaagccgattgcgattgaagcggcattcgggccaggtgaa
cagttgccgccacttgaaatcccgttacgacgcggcaatcagatgaacttgcgcggtcgt
atcgacagagtggatgcgactgaaattgacggtaaaaagtatttgcggatcgtcgactat
aaatcatctgcccagcaactggatctgaccgatgtctattatggcatttccttgcagatg
ttgacgtatttagatgttgccgtcgaacatgcggaagaatggattggattcaaagcggat
ccagcaggcgtgctctatttgcatatccacaatccgatgatccggacggaaatcgaattg
acggaagaattgattgaacaagaaatcctgaaatcgtataaaatgcgcggctacctgctc
gatgatccggaagtcgtcacgggtatggatgcacaaatcggcaagacgtcatctgttatt
cccgcctcgttcaagacggacggctcgtttacgaaagcgtcgaaggtgttgtcgacggaa
gatttacacaccgtcaggaaattcgtcaggcatagacaccagcaagcgggagacgggatg
ctggcaggcgatacacgcgtatatccatacaaactaaaggataaaatgccttgccagttt
tgttcgtatcggtcggtttgccaatttgacccgacagaccctgatcaggcttatagacag
tacgagtcgatggattctgagcaatcactcgaaaaaatgcggaaggacgtgacagatgat
ggacattccagttaa
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integrated database retrieval system
