Sporosarcina oncorhynchi: QWT69_05305
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Entry
QWT69_05305 CDS
T10260
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sow Sporosarcina oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sow03400
]
QWT69_05305
DNA repair and recombination proteins [BR:
sow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QWT69_05305
Archaeal homologous recombinant proteins
QWT69_05305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
nSTAND3
SMC_N
ABC_tran
BORCS6
Motif
Other DBs
NCBI-ProteinID:
WOV88533
LinkDB
All DBs
Position
1128435..1131512
Genome browser
AA seq
1025 aa
AA seq
DB search
MKPVQLTMTAFGPYKGTEVIDFRKLEDHRLFVVSGSTGAGKTTIFDGICFALYGQASGED
RTEARSMRSDFADDSMPTSVELIFEIQRRTYRVMRQIPYLKSGNKTETSAKYEFFELTDS
GEVPVVDRQIVSEINRKIEELVGFTIDQFSQIVMLPQGEFRKFLTSDTENKETIMRKIFK
THDYREMVDVLKNRKDSAAFLLAEEKRTVDSLVGQIPSLIPTRESLIFNVLEQEYTNSSQ
VMHGLEEEVVYYSQKAIDDELNYKSLYDQHANLLTAFHSAKTNNAQFDQLEQRKMTFEKL
TTEIPDIKEKEKRIANADRAAVIHEIEVYYKQQADEEKAKQDVSTKAEELVVSARKYYAD
VNRSYEEIQKQEPLRAEVTEQLIRLRDHLPAVTDLAAKESKILALSEELKRMKEAFTITL
RKSEEEKQKLVGLKANIDKNDKILLPYDKLVETLNIIQVHGKAVQEVNNLTTNLKGLGEQ
YKTASSTFNKLKNEFEKLQNDWLDDQASHLAETLMEGEPCPVCGSAHHPTINSKQFDHSI
TREELESKRLQLSKAESAFRSAEAKYEAVQEQLKLSQLEVQKQQITDTLPDLKRKRREVT
EQIEHLKMKREELVVMKDQLKYTEAESVKLDTKRTELEKTLYEKSSIYEKESALLQRDLN
SIPEGLRKLNVLQDEIKSKEVTKRQLDDAWVTIQKKREEAKEKEVTAINSLHYVKQALEE
SVKKRKQAEVRFFEALKNSDFATEDEYRKSKLSETDKRNLKDYVITFNQQLHTIKESIQE
LEKLLEGKNRTDLTHMSEKVELQKAAYEKAFTDWNSSMEHEKTLRNLMANLKKSVEGIVE
LERKVSKLTDVYDVVRGQNNHKLSFERFIQIDYLERIIQSANARLQNLSNGQYELIRSDR
QEVRGRQSGLGLDVYDAYTGQNRDVKTLSGGEKFNASLSLALGMADVIQSFQGAMSIETM
FIDEGFGTLDEEALRKAVDTLIDLQKSGRMIGVISHVEELKTAFPAILEVHKSLEGHSET
KFIIK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgtgcaattgacgatgacagcattcggtccatacaaaggtacggaagtaatc
gatttcaggaaacttgaagaccaccggctatttgtcgtatcgggatctactggtgctgga
aaaacgactattttcgacggaatctgtttcgccctttacggtcaggcaagcggagaagat
cgaacagaagcacgatcgatgcggagtgatttcgctgatgattcaatgcctacatctgtc
gaactcatttttgaaatccagcgccggacataccgggtgatgagacagattccctacctc
aaaagcggcaacaaaaccgagacgtctgccaaatacgagtttttcgaattgacggattca
ggcgaagttccagttgtcgatcgtcaaattgtctctgaaatcaatcggaaaatcgaagaa
ttagtcggatttacgattgatcaattcagccaaattgtcatgctaccacaaggagagttc
cgtaaatttctaacttccgatacggaaaacaaagaaaccattatgcgcaaaatttttaaa
acacatgattatcgtgagatggttgatgtgcttaaaaataggaaagatagcgcagcattt
ttactcgcagaggaaaagaggactgtggacagcttagtgggacagattccgagtcttata
ccaacgagagaatcgctgatctttaatgtgctagagcaagaatacacgaacagttctcaa
gtgatgcatggtctcgaggaagaagtggtgtactattcccaaaaggcaatagatgatgaa
ttgaactataagtccttatatgaccaacatgcgaatttgcttacggcttttcattccgca
aaaacaaataatgcacaattcgatcagcttgaacagcgaaaaatgacctttgagaaactg
acaacggaaatcccagacataaaagaaaaagaaaaacgcatcgccaatgcagaccgtgcc
gcggtcatccatgaaattgaagtctattacaaacagcaggcagatgaagagaaagcaaag
caagatgtttctaccaaagcggaggaacttgtcgtcagtgcacgaaagtattatgcggac
gtgaaccgttcttacgaagaaatccagaagcaggaaccattgcgcgcggaagtgaccgag
cagctgatcagacttcgggatcacttgcctgcagtgacagaccttgccgcaaaagaatcg
aaaatcttggcattgtctgaggaactcaaaaggatgaaagaagcttttacgattacattg
agaaagtccgaagaagaaaagcagaagcttgtagggttgaaagcgaatatcgataaaaat
gacaaaattcttctaccatacgacaaactcgtcgagacgttgaacatcatccaagtgcac
ggcaaagcagtccaggaagttaataatctgacaaccaatctgaaaggattgggtgaacag
tacaaaactgcgtcttcaactttcaacaaattaaagaatgaatttgagaaacttcaaaac
gattggctagacgatcaagcgtcccatctggctgaaacactcatggaaggggaaccttgc
cctgtctgcggaagtgcgcatcatcctactataaatagtaagcaatttgaccattccatt
acacgtgaagagttggagtctaaaaggctgcaactatccaaagcagaaagtgcattccgt
tctgctgaggccaagtatgaagcagttcaagaacagcttaagcttagtcaactagaagta
caaaagcaacagattactgatactttaccggatctgaaaagaaagagacgtgaagtaaca
gagcagatcgaacatttgaaaatgaaacgcgaagaattagtagtcatgaaagatcaattg
aagtataccgaagcagaatcagtaaaactggatactaaacggactgaactggaaaagaca
ttatatgaaaagtcgtccatatatgaaaaggaatcggctttattgcaaagggatcttaat
tcgattcctgaaggtttgcgaaagctaaacgttctgcaagatgaaatcaagtcaaaggaa
gtgacaaagcgccagttggatgatgcgtgggtgaccatacaaaaaaaacgagaggaagcg
aaagagaaagaggttaccgcaatcaattcccttcattatgtgaaacaggctcttgaagaa
agcgttaaaaagcggaaacaggcagaagtccggttctttgaagcattaaagaattccgat
tttgcgacagaagatgagtaccgcaaatcgaaattatccgaaacagataaacgcaatcta
aaagattatgtcattacatttaatcagcaacttcatacgataaaggaatccattcaagaa
ctcgaaaaattgcttgaaggcaagaatagaactgaccttacgcacatgtctgaaaaagtg
gagctacaaaaagctgcttatgaaaaagcatttactgattggaacagttcgatggaacat
gaaaagacactgcggaatttgatggcgaatttgaagaaatcagtggaaggtatagttgaa
cttgagcggaaagtatctaaactgactgacgtctatgatgttgttagagggcagaacaat
cataagctttcttttgaacgttttatacaaatcgattatttggaacggatcatccaatcc
gcgaatgcacgtcttcaaaatttatcaaacgggcaatatgaattgatacgcagtgaccga
caggaagtgaggggccggcaaagtggtctcggtttagatgtttatgatgcgtatacggga
caaaacagagatgtgaaaactttatcaggcggggaaaagttcaatgcatcccttagtttg
gcacttggtatggcggacgtcatccaaagcttccaaggagcgatgtccattgaaacaatg
tttatcgatgaaggatttggcacgttggatgaagaagctttgagaaaagcggtcgatacg
ttaattgaccttcaaaaatcgggtagaatgattggtgtcatttcccatgtggaagaactg
aaaactgcatttccagccattcttgaagttcataaatctcttgaaggtcatagtgaaacg
aaattcattattaaataa
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