Sporosarcina oncorhynchi: QWT69_05655
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Entry
QWT69_05655 CDS
T10260
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sow Sporosarcina oncorhynchi
Pathway
sow03030
DNA replication
sow03430
Mismatch repair
sow03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QWT69_05655 (dnaE)
03430 Mismatch repair
QWT69_05655 (dnaE)
03440 Homologous recombination
QWT69_05655 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sow03032
]
QWT69_05655 (dnaE)
03400 DNA repair and recombination proteins [BR:
sow03400
]
QWT69_05655 (dnaE)
Enzymes [BR:
sow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QWT69_05655 (dnaE)
DNA replication proteins [BR:
sow03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QWT69_05655 (dnaE)
DNA repair and recombination proteins [BR:
sow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QWT69_05655 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
tRNA_anti-codon
PHP
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WOV88600
LinkDB
All DBs
Position
1206753..1209818
Genome browser
AA seq
1021 aa
AA seq
DB search
MVLVYPQIVTGADLLRGIIKLDHLAPLLTRRGAKTVGIVNSRMYGVRSFCKTMKKYGIHT
AIGLSIRLAVDDDRIVLLYGYAKDDRGYESLLKISSAIAIGEQDTLPLKWLKAYSEGCIF
ICATTDASWERSRDKETIELIKETCEMVFVGISRAGGLKHPDEELIEGIAADAGLEITAI
QESRYLTKEDTFAYDVATAIRSGYKLNDPSKPVQEAVDAYLPTEEEFNKWFSDRPEWIAT
MADMLMSCTAELPPSRTLMPAFPVPENMTAGEMLRELCEKGLSRRHAQADREYSDRLSYE
LDIIDQMGFSDYFLIVEDFMTYSRKHGILTGPGRGSSAGSLVAFALGITDVDPIKYGLIF
ERFLNPGRITMPDIDIDFADNRRAEVIEYVASKYGKSHVAQIITFGTLSAKSVARNVARV
FDFSTEEMAFISKQIKEGQHKDLEESVRRSKALQDWIAIDPLRSKWLQAAVALEGLPRNA
STHAAGIILSPVPLVEVVPVQHGGDDLYLTQWAMGDVEEVGLLKMDFLGLRNLTLLDRIS
SMIQHDKRVKLKFEDFPMNDEKTYELFRNGDMTGVFQFESDGMRDALRLIKPDEFKDLYA
INALYRPGPMENIALYSRRKNENEKVRYIHPLLEPILKETEGIIVYQEQIMQIAVKIAGF
TMAEADLLRRAVSKKKRDVLQREREHFVESAVHNGFPEISAMEIYDLIVKFADYGFPKSH
AVAYSLISYQLAFIKANEPVYFYAALLAMATGNQEKTMELIHEIRSKGIVVLPPSIQRSK
YSTVVEGSSIRIGLGAIKGVTPAFYEIIKEARTSKPWQTLFDFAAAIGGANFSEKAILPL
VKSGALDDFGENRSVLLASIDAAANHAMFVSPEGDDLLHDIIFSIAQPKYSPGGTMPRLA
MLEYEREVLGFYLSEHPAVEMKKMVGGHAVDLAEIPKVKARTSVKVVGLIREIKRIRTKK
GEAMAFLTLQDETGELSCTLFPRTYALVNMHLQELTMVQLEGTVEDRNGQIQMLVQELMK
V
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
ttggtacttgtctatccgcaaatagtgaccggcgctgatctcctgcgcggaataattaag
ctagaccatttagccccacttctcacaagaagaggggctaaaactgtaggtattgtaaac
tccaggatgtacggtgtccgctcattctgcaaaacgatgaaaaaatacggcatacataca
gccattggactttcgattcgtcttgctgttgacgatgaccgaatcgttttactatatggc
tacgcaaaggatgatcgagggtatgaaagtctgctgaaaatcagcagtgccattgcgatt
ggcgaacaggacacactacccttgaaatggttgaaagcttatagcgagggttgcattttt
atttgcgcgacaaccgatgcttcttgggaaagatcgagggacaaagagacgattgaactg
ataaaagaaacgtgtgaaatggttttcgtaggcatctcaagagctggcggactaaagcat
ccagacgaagaattgatagaaggtattgcagcagacgcggggttggagattactgctata
caagaatcgaggtatttaaccaaagaggacacatttgcgtatgatgtcgccacagcgatc
aggtcaggttataaattgaatgatccgtcaaaacctgtacaggaagctgtcgatgcctat
ttgcctacagaagaggaattcaataaatggttttcagatcggcctgagtggattgctacg
atggcagatatgttgatgtcttgtactgctgaactgcctccaagccgaacattgatgcct
gcatttcccgttcccgagaatatgacagcgggtgagatgctaagggaactttgtgaaaag
ggcttgagcagaagacacgcacaagcagaccgtgaatattcggatcggctatcttacgaa
ttagacataatcgatcagatgggtttctcggattatttcctgattgtcgaagattttatg
acttattcaaggaaacatggcattctaacgggacctggacgtggttcctcagcggggtcg
ctcgtcgcttttgcactcggaatcacagatgtggatccgataaaatacggactgattttc
gagagattccttaatcctggcaggattacaatgcccgatatcgatattgattttgcagat
aaccgccgagcagaagtcattgaatatgtcgctagtaaatatgggaaatctcatgtggcg
caaattattacgttcggaacattatcggcaaaatccgttgcacggaatgtagcgcgcgtt
tttgatttctcaacggaagaaatggcattcatttcaaaacagattaaagaagggcaacat
aaagacttagaggagtcggttagacgatcgaaagcattacaggattggattgccatcgat
ccattgcgctcaaagtggctacaagcggctgttgctcttgaaggattgccgcgaaatgcg
tccacgcacgccgcgggcatcattctttcccctgtaccactcgttgaagtagttcctgtt
caacatggtggagatgacctctatttgacccaatgggcaatgggggatgtggaagaggtt
ggcttattgaaaatggactttcttggactacggaacttaacattattagaccgaatcagc
tcgatgatacaacatgataaaagagtaaagttaaagttcgaagattttccgatgaatgat
gaaaagacgtacgaattgtttagaaatggtgatatgacgggtgtttttcaatttgaatcg
gacggtatgagagatgcactccgtctgattaagcccgatgaattcaaagacctttacgca
atcaatgctctttatcgaccggggcctatggaaaacattgcactctatagcagaaggaaa
aatgaaaacgagaaagttagatatattcatccactactggagccgattttaaaggaaact
gagggaatcatcgtctatcaggagcagattatgcaaattgccgtaaagattgctggcttc
actatggcagaagccgatttgctcagaagggcggtcagcaagaaaaagagggatgttttg
cagcgagagcgtgagcatttcgtggagagtgctgtgcacaatggttttcccgaaatttcc
gcaatggaaatctatgacttaatcgttaaattcgctgactatggattcccaaaaagtcat
gctgtcgcctattcgttaatttcgtatcagttggcattcatcaaagcgaatgagccagtc
tatttctatgctgcattattggcgatggcaactggtaatcaggaaaaaacaatggaattg
attcatgaaatccgttcaaaagggattgtcgttcttccgccctctatccagaggagcaaa
tactcaacagttgtagaaggatcatccatccgaattggtcttggcgctatcaaaggagtg
acgcctgccttctatgaaattattaaagaagcaagaacgtccaagccttggcaaacgcta
ttcgattttgccgcagcaatcgggggcgctaatttctctgagaaagcgattctcccactc
gttaaatcaggggcgttggacgactttggcgaaaatcgttcagtgctgctcgcctcaatt
gacgcggcagcaaaccatgcaatgtttgtaagtcctgaaggggatgatttactgcatgac
atcatcttctcgattgcacagccaaagtattctccgggaggcacgatgccgcgtttagca
atgcttgaatacgaacgagaagtgcttgggttttatttatccgaacatcctgccgttgag
atgaagaagatggtcggaggtcatgctgtcgacttagcagaaattcctaaagtgaaagcg
agaacttcagtgaaagttgttgggctaattcgggaaataaaacgaattcgaacgaaaaaa
ggagaagcgatggcttttttgacgcttcaggacgaaacaggcgaattatcatgcacgctg
ttcccgagaacctatgcattagtgaacatgcatttacaggagctaacaatggttcagcta
gaaggaacggtagaggaccggaatgggcaaatacaaatgcttgttcaggaactcatgaag
gtataa
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