Sporosarcina oncorhynchi: QWT69_05740
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Entry
QWT69_05740 CDS
T10260
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sow Sporosarcina oncorhynchi
Pathway
sow03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QWT69_05740 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sow03400
]
QWT69_05740 (mutM)
Enzymes [BR:
sow01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QWT69_05740 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QWT69_05740 (mutM)
DNA repair and recombination proteins [BR:
sow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QWT69_05740 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Zn_ribbon_TFIIB
DZR
Csm1
PknG_rubred
Lar_restr_allev
NFACT_N
Ribosomal_L33
Motif
Other DBs
NCBI-ProteinID:
WOV88613
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All DBs
Position
1228108..1228980
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AA seq
290 aa
AA seq
DB search
MPELPEVEGVVRELAPAASGRTIEKVYISNVVRNSKELGKEAIIKGIALEDLTDKLPGMS
IQDVTRRSKYIYFHMEKAGHTYLLVSHLGMTGAWFVVDSVDEVTEKRFKDHIHIVLTMED
GGLLVYSDIRRFGELRLLVEESDYLPLLKMAPEPFDPEAEEHFIEIAIQPKYARKAIKEV
IMDGQIISGCGNIYATEALFRMDIHPARAAGRISEKRKRELFQTIVDVLLESINAGGSSI
SDYRNINGEAGTMQTRLKMYGKKYCPTCGRETKTMKIAGRTSVYCPQCQK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactacctgaagtggaaggggtcgtgagggaattagcaccggccgcatcaggc
agaaccattgagaaagtatacatttccaatgtggtcaggaattcgaaagaactcggaaaa
gaagcgattatcaaaggaatcgccttggaagatttgaccgataagttgcctggaatgtcc
attcaagatgttacgagaagaagtaaatatatttattttcatatggaaaaagcaggacat
acctatttgctcgtcagtcatctcgggatgacgggcgcatggtttgtcgtagattcagta
gatgaagtgacagaaaaacggtttaaagatcatatccatatcgtgttgacgatggaggac
ggcggcctacttgtctattcagatatacgcagattcggagagttacggcttctagtagaa
gaaagtgattatttaccattgctgaagatggcgcctgagccgtttgaccctgaagccgaa
gagcattttatcgaaatagcaatacaaccaaaatacgcccgtaaagcaatcaaagaagtg
attatggatggccagatcatttctggatgcgggaatatttatgcgacagaagcgctgttt
cggatggacatccatccggctagagctgctggtaggataagcgaaaaaagaaagcgcgag
ctcttccaaactattgttgatgtgctacttgaaagcattaatgcgggaggcagttccatt
tctgattaccgtaatataaatggtgaagcagggacaatgcagacccgattaaaaatgtat
ggaaagaagtattgtccaacgtgtggacgagaaacaaaaacgatgaaaattgcgggcagg
acatctgtatattgcccgcaatgtcaaaagtaa
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