Sporosarcina oncorhynchi: QWT69_05910
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Entry
QWT69_05910 CDS
T10260
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sow Sporosarcina oncorhynchi
Pathway
sow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWT69_05910 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sow03019
]
QWT69_05910 (recQ)
03400 DNA repair and recombination proteins [BR:
sow03400
]
QWT69_05910 (recQ)
Enzymes [BR:
sow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QWT69_05910 (recQ)
Messenger RNA biogenesis [BR:
sow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QWT69_05910 (recQ)
DNA repair and recombination proteins [BR:
sow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QWT69_05910 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Peripla_BP_4
T7SS_ESX_EspC
HHH
Motif
Other DBs
NCBI-ProteinID:
WOV89165
LinkDB
All DBs
Position
1263532..1265304
Genome browser
AA seq
590 aa
AA seq
DB search
MIEKIVSVLSNHFGFSSFRTGQEQAIRNVLDGKDTLCVMPTGGGKSICFQVPALVMEGTV
LVVSPLISLMKDQVDALHQLGISAAYINSSLSSEEYFGVVENALAGKYDLLYVAPERFES
APFIQQISKMNIPMIAIDEAHCISQWGHDFRPSYRMMNKVIASFERKPVVLALTATATPA
VREDIRAQLQIDENATVMTGFERSNLTFSVVKGQDREKFVKDYVNKNDGEAGIIYAATRK
AVDQVHAMLERTGVKVAKYHAGLSDSVRQAEQDRFLMDEATVMVATNAFGMGIDKSNIRY
VIHYQMPKNMESYYQEAGRAGRDGLDSDCTLLFSSQDVITQRFLIDQSLDTSRIPAELEK
LQSMIDYCHTESCLQKFIITYFGETNVKICGRCANCTDTRERLEVTVDVQKVLSCVIRMG
QRFGKTMIAQVLTGSRNKKVIEFGFDKLSTYGILKGQNTKAVTDLIEFIISENYLGVENG
QFPIIYVTEQGKEVLTGNIQVYRKQTVETKQIAKDDPLFDQLRTLRMQLAKEAGVPPFVV
FSDKSLRDMASRMPATEEEFLEVNGVGAAKLERYGEAFLEEIKSFNAQPI
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
ataatcgaaaaaattgtatctgttttatcaaatcactttgggttttcttcctttcggaca
ggtcaggaacaggcaatccgcaatgtccttgatggaaaagacacattatgcgtaatgccg
acaggcggcggtaaatctatctgttttcaagttcctgcgcttgttatggaaggtactgtc
ctcgtcgtatcaccgctaatttcactgatgaaagaccaagtggatgcattgcatcaactc
gggatatccgccgcctacatcaacagttcattatcaagcgaagaatattttggagttgta
gaaaatgcattggcaggtaaatatgacttattatatgtagcgcctgagcggttcgagtcg
gctccgttcatccagcaaatcagcaaaatgaatataccgatgattgctattgatgaagcg
cattgtatttctcaatggggtcatgatttcagaccaagctacagaatgatgaacaaagtg
atcgcttcgtttgaaagaaagccagtcgtcttagctttgacggctacagcgactcctgct
gtgcgggaggatatacgtgcacaactacaaatcgatgagaatgccacggttatgacaggg
tttgaaagaagtaatcttacgttttctgtcgtcaaagggcaagatcgcgagaaattcgtg
aaagattatgtgaataagaatgatggtgaagcagggatcatctatgcagcgacccggaag
gcagtcgatcaggtgcatgcaatgttggaacgcacaggtgtgaaagtcgcgaagtatcac
gcgggtttatcagacagtgtgcgtcaagcggagcaagatcgattcttaatggacgaggcg
acagtcatggttgcaacaaatgcattcgggatgggaatagacaaaagtaatatccgatat
gtcatccattatcagatgccgaaaaatatggaaagttattatcaagaagctggccgtgcg
ggaagggacggcttggacagtgactgtacactgttgttttcgtcacaagacgttattacg
caacgtttcctcatcgatcagtcattggatacgtcgcgtatacctgctgaacttgaaaaa
cttcaatctatgattgattactgtcatacagaatcctgcttgcagaaattcatcattact
tatttcggggaaacaaatgtaaaaatttgcgggagatgtgcgaattgtacggatacaagg
gaacggttagaagtgaccgttgacgtacagaaagtgctttcctgcgtcattcggatggga
cagcgatttggaaaaacgatgattgcacaagtattgacaggttcacggaataagaaagta
attgaattcggttttgacaaattgtcaacgtatggaattctaaaggggcaaaatacaaaa
gccgtgacagacttaattgaattcatcatctccgaaaactaccttggggtcgaaaatggc
cagttcccgatcatctatgtgacggaacaaggaaaagaagtattgactggtaacattcaa
gtttaccgcaaacagacggttgaaacaaaacagattgcaaaagatgatccgctgtttgac
caattgcgcacattgcgcatgcaattggcaaaggaagcaggcgtaccaccgtttgtcgtg
ttttcggacaagtcgttacgtgatatggcatctagaatgcctgcaacagaggaagagttc
ctagaagtaaacggtgtcggagcggccaagttggagcgctacggtgaagcatttctagaa
gagattaaatcattcaatgcccagccaatttga
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