Sporosarcina oncorhynchi: QWT69_08905
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Entry
QWT69_08905 CDS
T10260
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sow Sporosarcina oncorhynchi
Pathway
sow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWT69_08905 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sow03019
]
QWT69_08905 (pnp)
03016 Transfer RNA biogenesis [BR:
sow03016
]
QWT69_08905 (pnp)
Enzymes [BR:
sow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QWT69_08905 (pnp)
Messenger RNA biogenesis [BR:
sow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QWT69_08905 (pnp)
Transfer RNA biogenesis [BR:
sow03016
]
Prokaryotic type
tRNA degradation factors
QWT69_08905 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_2
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
WOV86075
UniProt:
A0ABZ0L1L4
LinkDB
All DBs
Position
complement(1855559..1857682)
Genome browser
AA seq
707 aa
AA seq
DB search
MTEQKKVYSLEWAGRPLTIETGQLAKQANGAVLVRYGDTTVLSTATASKKPKPLDFFPLT
VNYEERMYAVGKIPGGFIKREGRPSEKAVLTSRLIDRPIRPLFADGFRNDVQVISLVMSV
DQNCTSEMAAMLGSSLALSISDIPFEGPIAGVQIGRIDDEFIINPNPDQLEKSDLDLVVA
GTKDAINMVEAGAKEVAEDIILEAIMFGHEQIIKLIEFQEMIIAEVGKEKMEITLFQLDE
DVLNEVKEKCETDLINAIQTEEKHAREEAITAVKNDILEFYTEAEADDDKMKQVKSVLDH
LVKEEVRRLITDEKVRPDGRGLDEIRPLASEVGILPRTHGSGLFTRGQTQALSVCTLGAL
GEVQIIDGLGLEESKRFMHHYNFPNFSVGETGPIRGPGRREIGHGALGERALEAILPDEK
DFPYTIRLVAEVLESNGSSSQASICASTMAMMNAGVPIKAPVAGIAMGLVKKGENYSVLS
DIQGLEDHLGDMDFKVAGTEKGITALQMDIKIDGLSREILEESLTQAKIGRMKILSHMLS
TISTPSEELSAYAPKIIMIHINPDKIRDVIGPGGKVINKIIEETGVKIDTEQDGTIYISS
PDSPMNEKAKAMIENIVREAKVGEYYLGKVKRIEKFGAFVEIFPGKDGLLHISEIQEERT
KAVEDVLKLDDELMVKVIEIDNQGRVNLSRKIVIKEEKEAAEKENNA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacagaaaaaagtttattcacttgagtgggctggaagaccgttgacgattgaa
acgggtcaactggcgaaacaggcaaacggcgcagtacttgtacgttacggcgatacaacc
gtattatcgacagcaactgcatccaaaaagccaaaaccgcttgatttcttcccattgaca
gtgaactatgaagagagaatgtatgcggtaggtaaaattccaggaggatttattaaacga
gaaggtcgtccgtcagaaaaagctgttttgacgagccgtctaattgaccgtccgattcgc
cctttatttgcggatggattccgtaatgatgtacaagttatctcacttgtcatgtctgtt
gaccagaactgcacatctgaaatggctgcgatgcttggatcatctctagcgttgtctatt
tctgatattccatttgaaggaccaatcgctggtgtccaaatcggccgtattgatgatgaa
ttcatcatcaacccaaatcctgaccagctagaaaaaagtgatcttgatcttgtagtagca
ggaactaaagacgcaattaacatggttgaagcgggtgcaaaagaagtcgctgaagatatc
attctagaagcgattatgtttggtcatgaacagatcattaaactcatcgaattccaagaa
atgattattgccgaagttggtaaagagaaaatggaaattacgttattccaattggatgaa
gatgtattgaatgaagtgaaagagaaatgtgaaacagatttaatcaatgctatccaaacg
gaagagaagcatgcccgtgaagaagcaatcactgcagtgaaaaatgatatactcgaattc
tacacagaagcagaagctgatgatgataaaatgaagcaagtgaaaagcgttctggatcac
cttgtcaaagaagaagtccgtcgactgatcactgatgaaaaagtccgtcctgatggtcgt
ggtttggatgaaatccgcccattagcatcagaagttgggattttaccccgtacgcatggt
tcagggctgttcacacgcggacaaactcaggctttgagtgtatgtacattaggtgcactc
ggtgaagtacaaatcattgatggtcttggacttgaagagtccaagcgtttcatgcaccat
tataatttcccgaatttcagtgtaggtgaaactggtccaatccgtggtccaggccgccgt
gaaattggtcacggggcacttggtgaacgcgcgcttgaagcaatcctacccgatgaaaaa
gatttcccgtatacaattcgtctagtggcagaagtgctcgaatcaaacggctcttcatcc
caggcgtcaatctgtgcatctacgatggcaatgatgaatgcaggggttcctattaaagca
cctgtagctggaattgctatgggtcttgtgaaaaaaggcgaaaattattctgtcctttca
gatatccaaggtttagaagaccacttaggcgatatggactttaaagttgctggaactgaa
aaaggaattacagctttacaaatggatattaagattgacggactttcccgtgaaattctt
gaagaatcactgacacaagccaaaatcggtagaatgaagattcttagccatatgctgtca
acaatctccactccgagtgaagagctgtctgcgtatgctccgaaaatcatcatgatccat
attaatcccgataagattcgtgatgtaattgggcctggtgggaaagtaattaataagatc
attgaagagactggcgttaaaattgacacagaacaagatggaacgatttatatttcatca
ccagattcaccgatgaacgaaaaagcgaaagcgatgattgaaaacatcgtccgcgaagcg
aaagtcggagagtattatttagggaaagtgaaacggattgaaaagttcggtgcatttgta
gaaatattccctggtaaagatggcttacttcatatttctgaaattcaggaagaacgtacg
aaagctgttgaagatgtcttgaaattagatgatgagctaatggttaaagtcatcgaaatt
gacaaccaaggccgcgttaatttatcccgtaaaatagttatcaaagaagagaaagaagca
gcagaaaaagaaaataacgcgtaa
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