Sporosarcina oncorhynchi: QWT69_11650
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Entry
QWT69_11650 CDS
T10260
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sow Sporosarcina oncorhynchi
Pathway
sow03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QWT69_11650 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sow03400
]
QWT69_11650 (uvrB)
DNA repair and recombination proteins [BR:
sow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QWT69_11650 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QWT69_11650 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_7
P-loop_SecA
AAA_19
AAA_30
AAA_22
SLFN-g3_helicase
TrwB_AAD_bind
AAA_16
DUF87
AAA_25
AAA
AAA_5
Motif
Other DBs
NCBI-ProteinID:
WOV86561
UniProt:
A0ABZ0L4R9
LinkDB
All DBs
Position
complement(2393413..2395395)
Genome browser
AA seq
660 aa
AA seq
DB search
MVQNFELQAPYVPLGDQPAAISKLVEGIEQGKKHQTLLGATGTGKTFTVSNVVTEINKPT
LVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSFYDYYQPEAYVPHTDTFIEKDATINDEID
KLRHSATSSLFERKDVLIVASVSCIYGLGSPEEYGKHVVSLRSGMEIGRNELLRQFVDNQ
YSRNDISFTRGTFRVRGDVVEIFPASQDENCIRIEFFGDEIDRLREVDALTGEILGERSH
VAIYPNSHFVTGDEKLQKAILNIEVELEERLKVLRKNDKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLQPPGATPFTLLDYFPDDFLLVVDESHVTLPQIRGMYNGDQARKNV
LVEHGFRLPSALDNRPLRFEEFEEFIHQGIYVSATPGPYEIEHTPEMVEQIIRPTGLLDP
IIEVRPIEGQIDDLIGEINERTKRNERVLITTLTKKMSEDLTDYLKDIGIKVNYLHSEIK
TLERIEIIRELRLGTYDVLVGINLLREGIDIPEVSLVTILDADKEGFLRSERALIQTIGR
AARNSEGRVIMYADRYTDSMKKAIDETNRRREIQKAYNEKHGITPTTIKKKIRDVIRATQ
VVEDDTSIIDKVTKGKKLSKDEKTKLLISLEKEMKASAKALDFERAAQLRDTILELKAEG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggtccaaaatttcgaactgcaagctccttatgttcctttaggcgaccagcccgcagct
atttcaaagcttgtcgaaggaatcgagcaaggcaaaaagcatcaaacattattaggcgct
acgggaacaggtaaaacattcactgtttctaacgtcgtgacggaaatcaataaacctacc
ctcgtcattgcacataacaagacgttggcaggtcaattatatagtgagtttaaagagttt
tttccaaataacgcagtagaatactttgtcagtttctatgattactatcaacctgaagcg
tatgtaccgcacacggatacatttattgagaaagacgcgacgattaacgatgaaatcgat
aaacttcgccactcggcgacttcttcgttattcgaacggaaagatgtactaatcgttgca
tctgtatcatgtatctacgggttaggttcgccggaggaatatggtaagcacgttgtttct
ttgcgaagtggtatggaaatcggtagaaacgaactacttaggcagttcgttgacaatcaa
tactccagaaatgatattagcttcacacgtggtactttccgcgttagaggggatgttgtg
gaaatttttccggcatcacaagatgagaattgtatacggattgagtttttcggagatgaa
atcgatcggttacgtgaagttgacgcgctgacaggtgagatattaggagagcgatcgcat
gttgcgatctatcctaattcccacttcgtaacaggcgatgaaaaactgcagaaggcaatt
ttaaatattgaagttgaattggaagagcgactaaaggtactgagaaaaaacgacaaattg
ctcgaagcacagcgattggaacaacgaacccgctacgatttagaaatgatgcgggaaatg
ggcttctgttcgggaattgaaaactactccaggcacttaacattgcagccacccggagca
acacctttcacgcttcttgactatttcccagatgatttcctactcgttgtcgacgaaagt
catgtcaccttgccgcagatacgcggtatgtacaacggagaccaggcgaggaagaatgtg
cttgttgaacatggtttccgtctaccttctgctttggataacaggccgttgaggttcgaa
gagtttgaagaattcatccatcaagggatttatgtatccgcgactccaggtccatatgaa
atcgagcatacacctgaaatggttgaacagattattcggccgactggtttactcgatcca
atcatcgaagtccgtccgatcgaagggcagattgacgatttaatcggtgaaatcaacgag
cgtacaaagcgtaacgaacgggtattgataaccacattaacgaaaaagatgtcagaagat
ctgacagactacttaaaagatatcggcatcaaagtgaactatttacattcagaaataaaa
acattagaacgaattgaaattatccgtgagctacggcttgggacatacgacgtcctcgtt
ggcatcaacttgctcagagaaggtattgacattccagaagtgtctttagtgacgattcta
gacgcggataaagaaggattcctgcgttcagaacgagcattaatccagacaatcggtcgt
gctgcccgaaactcagaaggtcgagtgatcatgtatgcagatcgctatacagattccatg
aaaaaggcgatcgatgaaacaaacagacgccgtgaaattcaaaaagcttacaatgaaaag
catgggattacgcctacgacaattaagaagaaaatccgtgacgtcatacgggctacacaa
gtcgtggaagatgacacgtcgattatcgataaagtgacgaaaggcaagaagttatcgaaa
gacgaaaagacaaagctgcttatttcgcttgaaaaagaaatgaaagcatctgctaaagca
ctcgattttgaaagagccgcacagttgcgcgatacgatattagaattgaaggctgaaggg
tga
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