Sporosarcina oncorhynchi: QWT69_14710
Help
Entry
QWT69_14710 CDS
T10260
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sow Sporosarcina oncorhynchi
Pathway
sow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWT69_14710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sow03019
]
QWT69_14710
03009 Ribosome biogenesis [BR:
sow03009
]
QWT69_14710
Enzymes [BR:
sow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QWT69_14710
Messenger RNA biogenesis [BR:
sow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QWT69_14710
Ribosome biogenesis [BR:
sow03009
]
Prokaryotic type
rRNA helicases
QWT69_14710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NAT10_TcmA_helicase
DeaD_dimer
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WOV87096
UniProt:
A0ABZ0L3B1
LinkDB
All DBs
Position
complement(2990670..2992175)
Genome browser
AA seq
501 aa
AA seq
DB search
MTKFSELNISESTQNALSRMGFEEATPIQESTITFGMEGKDVIGQAQTGTGKTAAFGIPL
IEKIDMNDTNVQALVIAPTRELAIQVSEEIYKIGYGRRARVLTVYGGQEIGRQIRALRNN
PQIVVGTPGRILDHINRKTLKLNNVQTLVLDEADEMLNMGFIEDINTILAAVPAERQTLL
FSATMPPAIRKIAETFMKNPEIVKIKSKEMTVENIDQYYVKSQEREKFDILSRLLNVHQP
ELAIIFGRTKRRVDELSHALNIRGYLAEGIHGDLTQAKRMSVLRQFKENKIDILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKSGMAITFVTPREMGYLRTVEETTK
KRMNPLQPPTEDEALIGQQRVAMEQLKEIVTKNELNDYMPLAAELLQGMDAQEIVAAAIR
SLTNEPDDTPIKITEERPLPNRKSSSSSRGGGGYKGNRSGGGRSSGGSRGGYGGGSGGSR
RSSGPREGGTRRDRPRGRTEK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaattttcagaacttaatattagtgaatccacacagaatgcactatcacgcatg
gggttcgaagaagcaacaccaatccaggagagcacaattacattcggtatggaaggcaag
gatgtaatcggccaggcacaaacaggtacaggtaaaactgcagcgttcggtatccctcta
atcgagaagatcgatatgaatgacacaaacgtacaggcacttgtcatcgcgccaacacgt
gaattggcaatccaagtatccgaagaaatctacaaaatcggttacggaagacgcgcacgt
gtattgactgtttatggcggccaggaaattggacggcaaattcgtgctttacgcaacaac
ccacaaatcgtagtcggaacacctggacgtattcttgaccatatcaaccgtaagacgttg
aagttgaataacgtacagacacttgttcttgacgaagcggatgaaatgttgaacatgggc
ttcatcgaagacatcaatacaattttggcagcagttcctgcagaacgtcaaacactattg
ttctctgcgacaatgcctccagcaattcgtaaaatcgctgaaacattcatgaagaaccct
gaaatcgtgaagatcaaatcgaaggaaatgactgtcgaaaacatcgatcagtactacgta
aagtcacaggaaagagaaaaattcgatattctttcacgtttattgaatgttcaccaacct
gaacttgcgattatcttcggacgtacaaaacgtcgggttgacgaactatctcacgcactt
aacattcgtggttaccttgctgaaggaattcacggtgacttgacacaagcgaagcgtatg
tcagttcttcgccagtttaaagaaaacaaaattgatatcctcgtagcgactgatgttgcg
gcacgtggacttgatatctctggtgtaacacatgtctacaactttgatattccacaagat
cctgaaagctatgtacaccgtatcggacgtacaggccgtgctggtaaaagtggtatggca
atcacattcgtcactccacgtgaaatgggttacttgcgtactgttgaagaaacaactaaa
aagcgtatgaatccacttcagccaccaacagaagacgaagcgctgatcggtcagcaacgt
gtagcgatggaacaattgaaagaaatcgtaacgaaaaacgaattgaacgattatatgcca
ttagcggcagaacttcttcagggtatggatgctcaggagattgttgcagcggcaattaga
tcgttgacgaacgaacctgatgatacaccaattaaaattacggaagagcgtcctttgcca
aaccgtaaatcatcatcatcttcacgcggcggcggtggctataaaggcaatcgtagcggt
ggcggtcgttcatccggcggtagccgtggtggatatggcggcggaagcggcggttcacgt
cgaagcagcggtcctcgtgaaggcggaactcgtagagatcgtccaagaggcagaacagaa
aaataa
DBGET
integrated database retrieval system
