Sporosarcina oncorhynchi: QWT69_15660
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Entry
QWT69_15660 CDS
T10260
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sow Sporosarcina oncorhynchi
Pathway
sow03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sow00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QWT69_15660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sow03021
]
QWT69_15660
03400 DNA repair and recombination proteins [BR:
sow03400
]
QWT69_15660
Enzymes [BR:
sow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QWT69_15660
Transcription machinery [BR:
sow03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QWT69_15660
DNA repair and recombination proteins [BR:
sow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QWT69_15660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF961
HHH_5
SpoIVA_ATPase
Motif
Other DBs
NCBI-ProteinID:
WOV87267
LinkDB
All DBs
Position
complement(3172474..3173418)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVMINEDSKFGKFIIEPLERGYGNTLGNSLRRVLLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVATIILNVKQLALKIYSDDEKVIEIDVKGEGKVTAADITHDSDVEV
LNPDLQIATLGKNGHLRMRMYAVRGRGYAPSDQNKREDLAIGVIPIDSIYTPVSRVNFQV
ENTRVGQSTNFDKLTFDIWTDGSIGPKEAVSLGAKILTEHLNIFVGMTDEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVLELANKSEDEMMKVRNLGRKSLEEVK
AKLDELNLELRSED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagattgagaaaccgaagattgaaacagttatgatcaacgaagattccaagttt
ggtaagtttattattgaacctctggaacgtggatacggaaatactttaggtaattcctta
cgccgcgtgcttctttcctcattaccaggtgctgccgttacttctatccagatcgacgga
gttcttcatgaattctctacaattgaaggtgtcgtcgaagacgttgcaacaattattttg
aatgtgaagcaacttgctctcaaaatctattcagatgatgagaaagtgattgaaatagat
gtgaagggtgaaggcaaggtgacagcagcagatatcacgcatgacagtgatgttgaagtg
ctgaatccggatcttcaaattgctaccctaggtaagaatggacacttgcgcatgcgtatg
tatgctgttcgtggccgtggatatgcaccttccgatcaaaacaaacgtgaggatcttgcg
attggtgtaattccgatcgactctatttacactccagtttcacgcgtcaatttccaagtc
gagaatactcgcgttggtcaaagtacaaactttgacaagttgacgtttgatatttggaca
gatggtagcatcggtccgaaagaagctgtttcgcttggagccaaaatcctgacggagcat
ctgaacatttttgttggtatgactgacgaagcacaaactgcagaaatcatggtggaaaaa
gaagaggaccaaaaagaaaaagtgcttgagatgactatcgaagagctcgatctttctgtg
cgatcttacaactgcctgaaacgtgcaggcatcaacacagtacttgaacttgctaacaag
tccgaggatgaaatgatgaaagtgcgcaacctaggccgtaaatcacttgaagaagtgaag
gctaaattggacgagttgaacttagagttacgctcggaagattaa
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