Sporosarcina oncorhynchi: QWT69_16435
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Entry
QWT69_16435 CDS
T10260
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
sow Sporosarcina oncorhynchi
Pathway
sow02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sow00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QWT69_16435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sow03000
]
QWT69_16435
Transcription factors [BR:
sow03000
]
Prokaryotic type
Helix-turn-helix
Other families
QWT69_16435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
RST
YhaL
Motif
Other DBs
NCBI-ProteinID:
WOV87415
UniProt:
A0ABZ0L495
LinkDB
All DBs
Position
complement(3310919..3312157)
Genome browser
AA seq
412 aa
AA seq
DB search
MKNVGSILKYYRMKNNLTQGELSEGICSISHLSKIESNRYVPHAETVDALFKRMNVVWAK
EVQTYETLKEKLNAFILHSVYYDLKSMEILYKELSDNEEFLQSTDLVNRYELYKLRYYLF
KQEIPRATQQVIILKKMMSTFNDYEKGISKVIFFMHDIFSQNFEKAEERLEQIEENRERI
PQMFEGELYYQKAYLLHTKAQYGRSSYFAELAVDHYQKDCNYIRLLHAQLLLAINYTNRD
LILQAEGLFKTVLRNSKMMELDELYQGALYNYSELQNRMGLHKSAYNLLMELKQLIEPRT
DYYTSILIHLLHTAAVEEMDFEVLLQELEAIVGRKNDAYLTTQLNYFRAMKISQQELFDY
CEEIAFPFYEEYGYIGEARSIAWKLANHYRSIGKLDAAKKYSLYYYEKGDEK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgtcggatcgatactcaaatactaccgtatgaaaaataatcttacacaaggt
gagttgtctgaggggatttgttccatatcgcatttgagtaaaattgagtcgaatcgatat
gtgcctcatgcagaaacggttgatgcgttatttaaaagaatgaatgtcgtttgggcgaaa
gaagtacaaacatatgagacgttgaaagagaaactcaatgctttcattttacactcagtc
tattatgacttgaagtctatggaaattctctataaagagctatcagataacgaagagttt
ttgcaatccaccgaccttgtaaataggtatgagttgtataaattacgttattatctattt
aagcaggaaattccacgtgctacgcaacaagtcatcatacttaaaaaaatgatgtctaca
ttcaacgattatgaaaaaggtatatcaaaagtcattttctttatgcatgatatcttctcg
caaaatttcgagaaagcggaagagcgcctggaacagattgaagaaaaccgcgaacgcata
cctcagatgttcgaaggcgaactctattaccagaaagcttatttgctccacacgaaagca
caatatggacgatcttcttattttgcggaactggctgtcgatcattatcaaaaagactgt
aactacatccgtctactgcatgcacaactactgctcgccattaattatacaaatcgtgat
ttgattttacaggcggaaggattgtttaaaacggttttacgaaattctaaaatgatggaa
ctggacgagctgtaccaaggtgcactttataattattcagagctgcagaatcggatggga
ctccacaagtctgcgtataaccttttgatggaactaaaacagttgattgaaccaagaacc
gactattacacatcaattctcattcatttacttcacaccgctgctgtcgaagaaatggat
tttgaagtactgttacaggagttagaagcgattgtaggaagaaaaaatgatgcctatttg
accacacaacttaactactttagggctatgaaaatatcccaacaagaactttttgactat
tgtgaagaaattgcatttcctttctatgaagaatatggttatattggagaagcaagaagt
attgcatggaagttagcgaatcactaccggtccatcggtaaattagatgcagccaagaag
tatagtttgtactattacgaaaagggagatgagaagtaa
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