Candidatus Nanosynbacter lyticus: TM7x_00185
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Entry
TM7x_00185 CDS
T03502
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sox
Candidatus Nanosynbacter lyticus
Pathway
sox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TM7x_00185 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sox03019
]
TM7x_00185 (groEL)
03110 Chaperones and folding catalysts [BR:
sox03110
]
TM7x_00185 (groEL)
03029 Mitochondrial biogenesis [BR:
sox03029
]
TM7x_00185 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sox04147
]
TM7x_00185 (groEL)
Enzymes [BR:
sox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TM7x_00185 (groEL)
Messenger RNA biogenesis [BR:
sox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TM7x_00185 (groEL)
Chaperones and folding catalysts [BR:
sox03110
]
Heat shock proteins
HSP60 / Chaperonin
TM7x_00185 (groEL)
Mitochondrial biogenesis [BR:
sox03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TM7x_00185 (groEL)
Exosome [BR:
sox04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TM7x_00185 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
TM7x_00185 (groEL)
Exosomal proteins of breast cancer cells
TM7x_00185 (groEL)
Exosomal proteins of colorectal cancer cells
TM7x_00185 (groEL)
Exosomal proteins of bladder cancer cells
TM7x_00185 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AJA06279
UniProt:
A0A6S4GP40
LinkDB
All DBs
Position
32652..34295
Genome browser
AA seq
547 aa
AA seq
DB search
MAKKVFYDDDARARVLGGAEALYNAVKVTYGPKGRNVVIAKGFGGPTVTHDGVTVAEGIE
LPENDDETLGYKVGADLIKQAAKNLNKQAGDGTTTVTVLTYSILKEANRLIAAGHNPMEL
RKGIEQAGAEIVKELNKLAEPIEGKSDRVAEVATISAGDAEIGKLIAGVIEKVGKDGVVT
VEAGQGLELEAEVVEGFSLDKGWVSPFFVTDTGRQEAVYEKPAILITDKKISSVQEFLPM
LEKLAQSGKKDVVLIADEVEGEALSILVLNKLKGVFNTVAVKAPSFGDRRKEILRDIAVL
TGATVISEDHGLTFENAGLEVLGSARKVIVGKDETTIVEGAGKPSAVKEQIAQIKALSDN
ASSEYEKEQFDKRAAALSGKVAVIKVGGATETEIDEKKFRVDDAVAATKAALAEGIVAGG
GVTLVNLAGGLKVTGADSIAAGRQILKDALKHPFLQIMRNAGLNADALLAQVEAGKAGFG
VNVMKPENELVDVKKAGVIDPARVTKEAVQNAVSIASTAATMGALVVDVPEPEAPAAPGG
MPGMGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaagttttttacgatgacgatgcgcgcgctcgcgtgttgggcggcgccgag
gcgctgtataatgcagttaaggtaacctacgggccaaagggccgcaatgtggtgattgcc
aaggggtttggcgggccaaccgtgacgcacgatggcgtgacagtggcggaaggaattgaa
ttaccagagaatgacgatgagacgctaggctacaaggttggtgcggatttgattaaacaa
gcggccaagaacttgaacaagcaggctggtgacggtaccacgacggtgacggtgctgacc
tattcgattttgaaagaggccaaccggttgatcgcggcagggcacaacccgatggagcta
cgcaaaggtatcgagcaggctggcgcggaaattgtcaaagagctgaacaaattagctgag
ccaattgagggtaagtccgatcgcgtggccgaggtagcgaccatttcggcgggtgacgcg
gaaattggcaaattgatcgctggtgtcatcgagaaagttggcaaagacggcgtggtgacg
gttgaagctggccaaggtttggagctggaagccgaggttgttgagggcttcagcctagat
aagggctgggtcagtccgttcttcgtcaccgacactggtcgacaagaggcggtttacgaa
aagccagcgattttgattaccgataagaaaatttccagcgtgcaagagttcctgccgatg
ctagagaaattagcacaatctggtaaaaaggacgtggtactaatcgctgatgaagttgag
ggcgaggcgctgagcattttggtattgaacaagctcaagggtgtatttaataccgtggcg
gtcaaggcaccaagctttggcgaccgccgcaaggagattttgcgtgacatcgcggtgctg
accggcgcaacggtgatttctgaagatcacggtttgacgtttgagaatgctggcctggag
gtcttgggctcagcacgcaaggtgattgtcggcaaagacgaaaccaccatcgttgagggc
gcgggcaagccatcagccgtgaaggagcagatcgctcagatcaaggcactgtccgacaat
gcttccagcgaatacgaaaaagaacaattcgacaagcgggcggcggcgctatctggcaaa
gttgccgttatcaaagtcggcggtgcgaccgagacagaaattgacgaaaagaagttccgc
gtggacgacgccgtggcagccactaaggcagccttggctgagggtatcgtcgctggtggt
ggcgtaaccttggttaatttggctggcggtctgaaggtgactggtgcagacagcatcgcg
gctggccggcagattttaaaggacgccctgaagcacccattcctgcagattatgcgtaac
gctggtttgaacgccgacgcactactagcgcaagtcgaggcgggcaaggctggctttggt
gttaatgtcatgaaacccgaaaatgaattggtggatgtcaaaaaagctggtgtcatcgac
ccagcgcgtgtcaccaaggaagcggtgcagaacgcggtatccatcgcttcgaccgcagcg
accatgggcgcattagtcgtcgacgtgccagagccagaagctccagctgcgcctggcggc
atgccgggtatggggatgatgtaa
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