Candidatus Nanosynbacter lyticus: TM7x_00330
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Entry
TM7x_00330 CDS
T03502
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sox
Candidatus Nanosynbacter lyticus
Brite
KEGG Orthology (KO) [BR:
sox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sox03016
]
TM7x_00330
Enzymes [BR:
sox01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TM7x_00330
Transfer RNA biogenesis [BR:
sox03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TM7x_00330
Prokaryotic type
TM7x_00330
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
LON_substr_bdg
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AJA06291
UniProt:
A0A6S4GSH8
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All DBs
Position
61732..62388
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AA seq
218 aa
AA seq
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MDEVILIDKPQGLTSFGVVARLRRVLSNQAGKKVKVGHTGTLDPFATGLMIIVTGKKCRE
AETFTKLDKWYEAEIVLGEKSSTGDPEGEIAEVSDYKPSVEEIQQVIGQFVGKIEQTPPI
FSAIKINGQRAYKLAREGKQVEIPKRTVEIYSLELLSYEYPKLRIKTHVSSGTYIRTLAV
DIGDRLNTGAYCENLRRTQIADYSIKEAKTLADFGITS
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtcattcttatagataagccacaaggtttgactagctttggggtggtggcg
cgcttgcgacgagttttatctaatcaagcgggtaagaaagtgaaagttggccacacgggt
acgcttgatccgtttgcgacaggattaatgattattgtgacaggaaagaaatgtcgggaa
gccgagacgtttactaagctagataaatggtatgaggcggagattgtcttaggagagaaa
agctcgacgggtgatcctgagggcgaaattgccgaagtgtctgactataagccgagtgta
gaggagattcagcaggtaatcggtcagtttgtggggaaaattgaacagaccccgcctatt
tttagcgcaataaaaattaacggtcagcgagcttataaattggcgcgcgaagggaagcag
gtggagatcccaaagcgtacagtggagatttattcactagaattgttgtcctatgaatat
cctaagttaagaatcaaaactcatgtttccagcggaacttatatccgaacattagcggtg
gatattggtgatagattaaatacgggtgcgtattgtgagaatttgcgccgcacacaaata
gccgattattctattaaggaagcgaagaccttggcggattttggaattactagctaa
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