Candidatus Nanosynbacter lyticus: TM7x_00890
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Entry
TM7x_00890 CDS
T03502
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sox
Candidatus Nanosynbacter lyticus
Pathway
sox03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TM7x_00890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sox03400
]
TM7x_00890
Enzymes [BR:
sox01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TM7x_00890
DNA repair and recombination proteins [BR:
sox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TM7x_00890
Prokaryotic type
TM7x_00890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJA06355
UniProt:
A0A6S4GPB9
LinkDB
All DBs
Position
166844..167506
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AA seq
220 aa
AA seq
DB search
MKFATWREFVEDQAEQPYFRALMNRVDAERERFDIYPPRQDMFSCFAACSLDRVKVVIIG
QDPYHGPGQAHGMSFSVRPSVKLPPSLQNIFKELVDNIGGDMPTSGFLEPWGKQGVLMMN
TSWSVRRGQAGSHAGYGWMEFSENLLKMLNNYDQPLVFILWGAHAQKVGQAITNPKHLKI
SSAHPSPFSAHRGFFGSRPFSRANDFLVQQGREAIDWQLP
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgcaacctggcgtgagtttgttgaggatcaggctgaacagccttattttcgg
gcgttgatgaatcgggttgatgcggagcgtgagagatttgatatttatccgccacgtcag
gatatgttttcatgtttcgcggcttgctcgctggacagagtgaaagtggtaatcattggg
caagacccgtatcacgggccagggcaggcgcatggtatgagtttttcggtgcgtcctagc
gtgaaattgccaccaagtttgcaaaatatattcaaagagcttgtggataatatcggcggt
gatatgccgactagtggttttttggaaccgtggggcaagcagggcgtgctgatgatgaac
actagttggagcgttcgtcgtggccaggcgggtagtcatgccggatatggttggatggaa
ttttccgaaaatttactaaaaatgcttaataattatgatcagccgctagtatttatcctt
tggggtgcgcacgctcaaaaagttggacaggcgattactaatccgaaacatttgaaaata
tctagtgcgcatccgtcgccgttttcggcgcatcgagggttctttggtagtcggccgttc
tcgcgtgctaatgattttctggtgcaacagggtcgcgaggcaattgactggcagctgcct
tga
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