Candidatus Nanosynbacter lyticus: TM7x_02270
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Entry
TM7x_02270 CDS
T03502
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sox
Candidatus Nanosynbacter lyticus
Brite
KEGG Orthology (KO) [BR:
sox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sox03400
]
TM7x_02270
DNA repair and recombination proteins [BR:
sox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TM7x_02270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_22
AAA_16
AAA_24
nSTAND3
DUF7125
AAA_30
SRP54
AAA
SLFN-g3_helicase
AAA_14
AAA_5
Lon_C
PAXNEB
Zeta_toxin
NB-ARC
NACHT
KTI12
NTPase_1
GvpD_P-loop
RsgA_GTPase
Rad51
DAP3
AAA_29
AAA_33
DZR
ATPase_2
AAA_19
ADK_lid
ABC_tran
DUF7129
GvpD_bR2
HypA
zf-C2H2_6
Motif
Other DBs
NCBI-ProteinID:
AJA06513
UniProt:
A0A6S4GR08
LinkDB
All DBs
Position
complement(423876..425225)
Genome browser
AA seq
449 aa
AA seq
DB search
MAKSRSQFICQQCGASFSKWAGKCENCGEWNSLVEQVISSGGSSAVDKSAGRGKALKTAS
VREAVAESSLERLSTGIDDLDVVLGGGFLAGGVVLVAGQPGIGKSTLLAQVAAYIAGSKS
VLYVSGEESISQVKLRAERLGAADSEKLQLASSNSAEDIAASIQQGGYDLVIVDSVQTIS
LSEISSAPGSVSQITNSSNVIIRAAKSSGTAVILVGHVTKEGSIAGPKILEHLVDVVLNF
EGDRYGGFRVVRAQKNRYGSTNEAAIFEMDDQGLRIVKNPSAELLAERRNLDGSIVLATM
EGARPLLVEIQALVNPTNFGYPKRTASGFDLNRLNLLVAVLEKRTKLKLADKDIYVNVVG
GLKLNDPAADLAVAMAIASASAGRSLDEGAVVFGEIGLGGEVRSAINWQARIKEAKKLGF
TYAIAPKVHKDKFIKGVSDMRQALIDYLQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatctcgaagtcaatttatctgtcagcagtgtggtgctagtttttcaaaatgg
gcaggtaagtgtgaaaattgtggggagtggaattcgttggttgagcaggttatttcttca
ggaggttcgtctgctgtcgataaatcggctggtcgcggcaaagctttaaaaactgctagc
gttcgtgaagccgtggctgaatctagcctagaaagattaagcacgggaattgatgacctg
gatgtggttttaggcggtggctttttggctggtggcgtggttttggtggcgggtcagccg
ggaattggaaaaagtactctgctagcgcaggttgcagcgtatattgctggctcaaaatct
gttttatatgttagtggcgaggagtcgatttcacaggtcaaattacgagcagaacgtttg
ggtgcggctgattcggaaaagttacagctagcgtctagtaatagtgccgaggatattgct
gcgtcaattcagcagggcggatatgatttggtgattgttgattcggtgcagactatttcc
ttgagtgaaatttcttcagcgccaggttcggttagccaaattaccaactcttccaatgtc
atcattcgtgccgccaaatcttcgggtacggcagtgattttggtagggcatgttactaag
gaaggttcgattgctgggccaaagatattagagcatctggtggatgttgtgctgaatttt
gaaggggatcgttatggtggttttcgagttgttagggcgcagaaaaatcgctatggttcg
actaacgaggctgcaattttcgagatggacgatcagggtctaagaattgttaagaatccg
tcggcagagcttttagcggagcggcggaatttggatggctcaattgtgctggcgactatg
gagggtgcaaggccgctgttagttgaaatccaagcgctggtgaatccgacaaattttgga
tatcctaagcgcacggcaagcggctttgatttgaatcggctgaatttgctggtggcggtc
ttggagaagcgtacaaaattgaaattggcagataaggatatttatgtcaatgtagtcggt
ggattaaaattgaacgatccagcggcggatttggcagtagccatggcaattgctagcgct
agcgctggtcggagtttagatgagggggctgtggtgtttggcgaaattggtttgggcggc
gaagttcgctcagcgatcaattggcaggctcgaatcaaggaagcaaagaagttaggtttc
acttacgcgattgctccaaaagttcataaagataaatttataaaaggcgtcagtgatatg
cgacaggcgttgattgactatttacagtaa
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