| Entry |
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| Symbol |
dnaE
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| Name |
(GenBank) DNA polymerase III subunit alpha
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| KO |
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| Organism |
sox Candidatus Nanosynbacter lyticus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:sox00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TM7x_02350 (dnaE)
03430 Mismatch repair
TM7x_02350 (dnaE)
03440 Homologous recombination
TM7x_02350 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:sox03032]
TM7x_02350 (dnaE)
03400 DNA repair and recombination proteins [BR:sox03400]
TM7x_02350 (dnaE)
Enzymes [BR:sox01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TM7x_02350 (dnaE)
DNA replication proteins [BR:sox03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TM7x_02350 (dnaE)
DNA repair and recombination proteins [BR:sox03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TM7x_02350 (dnaE)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(442081..445818)
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| AA seq |
1245 aa
MTGGNSGQSSPAALKPSDFVHLHNHTFHSVLDGLTKINDLVDKVKEFGMEAAAVTDHGTM
SGILDYYKTAKKAGIKPILGIETYVAARSRFDRDPAKDKQRFHLTVLAMNNTGFHNLMKL
STQANLEGMYYKPRTDHDLLEELNEGLIVLSGCASGEIGVALRDDDYDRARDIAKWYKSV
FGDRYYLELQDHGHPKSNTRWDVQAKINEGLIKLSKELDIEMVVTCDGHYLTHDHQDAHE
ILLCVGTGSYLSDEKRMSLKDFELHLTDPRDIIDHWGEEYPEVVRNTKKVADRCDVEIEL
GRILIPKYPLPDGENEHSYLLKLTYQGLLQRYNGASKEEAEKLDPDDIIPQLSDEVRQRA
EMELGVMGNMGYEGYFLIVQDFINWGKSQGIVFGPGRGSAAGSIIAYALNITDLDPLKYG
LLFERFLNPDRISMPDIDVDIQDTRRDEVIEYCAEKYGRDHVSNIATFGKMFGRMAVRDV
ARVLEVPYAESDRLAKLVPPPNQGRHIPLSVSIKEDADLRREYENNPTAKEVLDYAIQLE
GTIRSHGVHACGVVIAPDTLVNYIPLEMAQKGVVATQFPMGEVEELGLLKMDFLGLSNLT
IINNAMRIIRKAYNTEINLSQLPLDDKKTYELFQRGDTTGVFQLESAGMKRYLRGLKPTT
FEDIIAMVALYRPGPMQFIDSFIRRKHGEEEITYLHPGMKNSLKNTYGILVYQEQFMQIS
KEWCGFTGGQADTLRKAVGKKKIDLMKKVKPEFVEGAVKVGGATKEIAETFWTQLEEFAN
YCFNKSHAACYGLIAYWTAYLKAHYPDAFMAALMTSDHDDTDRLAIEITECKHMGIDVLS
PDVNESFVEFAVVPNENKIRFGMSAVKGVGVGAVEEVLRAREEGAFLSVEDFAKRVSTSK
FNRKAWESLIKSGAFDNMGDRSDLLFNLDSITAFSSKLQKEAASGQTNLFGMLGDDTASV
QSILNLQKAPVKHDDKERLMWERELLGLYISAHPLDRYETYLSEQTQPLTQLVPEYDSRM
MTVGGIISTVRTIVTKSGSKMAFVGIEDKFGEGEIIVFPNLYEKVGAKLLQDTVIRVSGK
NSARDRDGNLGSESKLIADDIIAITDNDINGYESTGRKMDAPKVSSAVKKERREAYRSQK
NGITPKPVVKSDADKFQPKTQPAPVNVTPEIPASKLFVYIKDPNDHPRLVKMKSVCGENA
GTTDVVLVLGEKEKSAMRLPFKVDANDNLLSQLKNTLGEECVILK |
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| NT seq |
3738 nt +upstreamnt +downstreamnt
atgactgggggaaatagcggacaatcttcgccggcggctttgaagccgtctgatttcgta
cacctgcataatcacacctttcattcggtgctggatggcttgactaaaatcaatgatttg
gttgataaagtcaaagagtttgggatggaggcggcggcggtaactgaccacggtacgatg
agtggcatccttgactattataagaccgccaaaaaagccggtattaaaccgatcctcggt
attgagacatacgtagcggcacgttcacgctttgaccgcgacccagccaaggacaagcag
cgctttcacttgacggtgttagcgatgaacaacaccggctttcataatctaatgaagttg
tctacgcaagccaacttggagggaatgtactataagccgcggactgatcatgatttatta
gaagagttgaacgagggtttaattgtactgagcggttgcgccagtggtgaaattggtgtg
gcgcttagagatgatgattatgatcgagcgcgagatattgccaaatggtacaagtcagtc
tttggtgataggtattatctcgagttgcaagatcacggccatccaaaatcaaatacgcgc
tgggacgtccaggcaaaaatcaatgagggcttgattaagctatcgaaggagctggatatc
gagatggtggtgacttgcgacgggcactacttgacgcatgatcatcaagacgcgcacgaa
attttgctatgtgtcggtaccggttcgtatctaagtgacgaaaagcggatgagtctgaag
gattttgagctgcatttaactgacccacgggatattattgaccattggggcgaggaatat
ccagaagtcgttcgcaacaccaaaaaggtcgccgaccgctgcgatgttgaaattgagctg
ggccgcatcctcattccgaaatatccgctgcccgatggcgaaaatgagcattcgtacctg
ctgaaattgacctatcaaggcttgctgcagcgctacaacggcgcctccaaagaagaagcc
gaaaaattagatcctgacgacatcattccgcaattatccgacgaagttcgccagcgcgcc
gagatggagctgggcgtgatgggcaatatgggctacgagggttattttttgatcgtccag
gattttatcaactggggcaaatcccaggggattgtcttcgggccgggtcggggcagtgcg
gctggctcgattatcgcctacgcactgaatattactgaccttgacccgctaaagtacggt
ctgctgtttgaacgtttccttaatccagatcgtatttccatgccggatatcgacgtcgat
attcaagacacccgacgtgacgaagtgattgaatattgcgctgaaaaatatggacgcgat
catgtgtcgaatatcgctacctttggtaaaatgtttgggcgtatggcggtgcgcgatgtc
gccagggtgctggaagttccttacgccgagagcgaccgcttggctaagttggtgccgccg
ccaaaccagggtcgtcatattccgctatcggtcagtattaaagaagatgcagatttgcgc
cgtgagtatgagaataatcctactgccaaagaagtattagattatgctattcagcttgaa
ggcacgattcgcagccacggagttcatgcttgtggtgtggtgatcgcgccagacacgctg
gttaattatattccgctggaaatggcacaaaaaggcgtggtggctactcaattcccgatg
ggtgaagttgaggaactggggcttcttaagatggattttttgggcctcagtaaccttacg
attattaacaacgccatgcggattatccgaaaagcttataatacagagattaatctttcg
cagctgccgcttgacgataagaaaacttatgagctattccagcgcggcgatacaaccgga
gtattccagttggagtcggcggggatgaagcggtatttgcgcggactaaagccgaccaca
tttgaggatattatcgctatggtggctctttatcgtccgggcccgatgcagtttattgac
agttttattcggcgcaaacatggcgaagaagaaataacttatttgcatcctggaatgaaa
aactcactaaaaaatacttacggaattttggtctaccaagagcaatttatgcagatttct
aaggaatggtgcggctttactggtggtcaggctgatacgctgcgtaaagctgttggtaag
aaaaagattgacttgatgaaaaaagttaagcctgaatttgtcgaaggtgcggttaaggtc
ggtggcgctactaaggaaattgcggaaacgttttggacacagctggaggagttcgctaac
tattgtttcaataaatcgcacgctgcttgttatggcttgattgcctattggacggcttat
ttgaaggcgcattatccggacgcgtttatggcagcactgatgaccagtgaccatgatgac
acggatcgtttggcaattgagatcacggaatgtaaacatatgggaattgatgtgcttagt
ccagatgtcaatgaatcgttcgttgaatttgctgtggtgcctaatgaaaataaaattcgc
tttggtatgtcagcagtgaagggtgtcggtgttggtgcggttgaggaagtcttgcgggcg
cgcgaggaaggcgcgttcttgtcggtggaggatttcgccaagcgtgtttcgaccagcaag
tttaatcgtaaggcttgggaatctcttattaagtccggcgcctttgacaatatgggcgat
cggtcggatttgctattcaatctggactccatcacggcattttcctctaagcttcaaaaa
gaagccgccagtggtcagactaatttgttcggtatgttgggtgatgacacggcaagcgtt
cagtcgatacttaatctacagaaagcgccagtaaagcatgatgataaagaacgtctgatg
tgggagcgggaactactggggctgtatatttcggcacacccgcttgatagatacgagact
tatctaagcgagcaaactcagccattgacgcaattggttccggagtatgacagccgaatg
atgacggtcggcggaattattagtacagttcggacaattgtgacgaagagtggctcaaag
atggcgtttgtgggaattgaggataaatttggtgagggtgaaataattgtctttccgaat
ttgtatgaaaaagttggcgctaagttgcttcaggatacggtaattcgagtttctggtaaa
aactcagcgcgagatcgtgatggaaatttgggtagtgaaagtaaactcattgctgatgac
attatcgcgattacagacaatgatattaatggctatgagtcaactggtcgtaagatggac
gctccaaaggttagttctgcggttaagaaagaacgccgcgaggcttatcgcagtcagaag
aatggaatcacgcccaagcctgtcgtaaaatctgatgcggataagtttcagccaaaaact
caaccggcgccggttaacgttactccggaaatccccgcctccaagttgtttgtatatatt
aaagacccgaatgatcatccgcggttagtgaaaatgaagtctgtttgtggtgagaatgct
ggcacgactgacgtggttttggttctgggggaaaaggaaaaatcagccatgcgtctgcca
tttaaggtggatgctaatgataacctattaagccaattaaaaaacactctgggtgaagag
tgcgtaattctaaagtga |
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