Candidatus Nanosynbacter lyticus: TM7x_02770
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Entry
TM7x_02770 CDS
T03502
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
sox
Candidatus Nanosynbacter lyticus
Pathway
sox03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TM7x_02770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sox03400
]
TM7x_02770
Enzymes [BR:
sox01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
TM7x_02770
DNA repair and recombination proteins [BR:
sox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
TM7x_02770
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TM7x_02770
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TM7x_02770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJA06571
UniProt:
A0A6S4GTX8
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All DBs
Position
complement(519428..520846)
Genome browser
AA seq
472 aa
AA seq
DB search
MAQTFFFYDLETSGLNPRQDRIMQFAGQRTDMNLEPIGEPYNLLVTLNDDTLPSPDALMV
TGITPQKTVEEGYSEAQFARMLSEEIFTPDTIAVGFNNIRFDDEFIRHLLWRNFHDPYEW
SWKDGRSRWDLLDAVRLTRALRPEGIKWPLDDKGEPSNRLELITSANGIAHENAHDALAD
VTALIAVTKLIKQKQPQLYDYLLKMRDKKVVQQLVNVDDKKPFVYASGRYDKEFAKTTVA
FPMTTSRNGGVVVYDLRYDPTPFVELSTEELSKKIFASWEERQAEDFVKLPVKELQYNRC
PAVAPLGVLEQGDGWQKISLDLKTVQKHQNILLNHPDFAEKLRTIFENKPAFKKLPDPEA
QLYDGFLNDRDRIRVEAVRNADERELADFHPEFQDERLAPLLLHYKARNFPRSLSEDDLA
QWEIWRAQYLQAQLPGFMASLQRLAPTAADKQQFILQELQLWAESVLPVVDS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaacatttttcttttatgacctggaaaccagcggattaaatccgcggcaagac
cgaatcatgcagtttgccgggcagcggacagacatgaatctcgagccgattggtgagcct
tataatctgctggtgacgctgaatgatgatactttgccgagtcctgatgcgctgatggtg
acgggcatcacgccgcaaaaaacggttgaggagggctacagcgaggcgcagtttgcccgg
atgctcagtgaggaaattttcacgccagacaccattgcggttggttttaataatattcgg
ttcgacgacgagtttattcgtcatttgttgtggcgtaattttcatgatccgtacgagtgg
agctggaaggacggccgctcgcgttgggacttgctggatgcagttcggttgaccagggca
ctcaggccagaggggatcaagtggccgcttgatgacaagggcgagccaagcaaccgtctg
gaactgatcaccagcgccaacggtattgcgcacgaaaatgctcatgacgctttggcggac
gtgacagcactgatcgctgtgacgaaattgatcaagcaaaagcagccgcaattgtatgat
tatttgctgaaaatgcgcgataaaaaagtagtccagcaactggtcaatgtggacgacaaa
aaaccgtttgtctatgccagcgggcgctacgataaagaatttgccaaaactacggtggca
tttccaatgacgaccagtcgaaacggcggtgtggttgtctatgatctgcgctatgatccg
acgccgtttgttgagctgagtactgaagaattatcgaagaaaatctttgcttcgtgggaa
gagcgccaggccgaagatttcgttaaattgccagtcaaagagttgcagtacaatcgctgt
ccggcggtagcgccgctgggtgtgctggaacaaggcgatggctggcagaagatttcgctt
gatctaaagacagtgcagaaacatcaaaatattttactgaatcacccggactttgccgaa
aaattacggactatttttgaaaacaagccagccttcaagaaattgcctgatccagaagcg
caattgtatgatggctttttgaacgaccgtgatcgtatccgtgtcgaggcggtgcgtaat
gctgatgagcgtgagctggccgattttcatccagaatttcaggacgaacggttagcgccg
ctgttgctgcactacaaggcacgtaattttccgcgctcactcagtgaagatgatttggca
caatgggaaatctggcgggctcagtatttgcaggcgcaactgccagggtttatggcgtct
ctgcagcggttagcgccgacagcagctgacaaacaacagtttattttgcaagaattgcaa
ttgtgggctgagtctgttttaccggttgttgattcttag
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