KEGG   Candidatus Nanosynbacter lyticus: TM7x_03075
Entry
TM7x_03075        CDS       T03502                                 
Name
(GenBank) ribonuclease
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
sox  Candidatus Nanosynbacter lyticus
Pathway
sox03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sox00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TM7x_03075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sox03019]
    TM7x_03075
Messenger RNA biogenesis [BR:sox03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     TM7x_03075
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH KH_2 NAD_binding_1 Ribosomal_S18
Other DBs
NCBI-ProteinID: AJA06601
UniProt: A0A6S4GU23
LinkDB
Position
complement(575734..577224)
AA seq 496 aa
MIEVVIAAAVGAGTGVAGLVGYQRTRQINGKNQIERDLADAKTKASDIVLKAKDEALKIE
NERRKEWQKTENRLADRERTLDNKLEELDRRAEKLRTHEDEVDNLKNEIRDIRTRQQEKL
EKIAGLKKKDAADKLMQMTERDIKQDLAGLVSKLQHDAMDDAEERAQMILVTAMERMSSE
VTAERTVTAVKLTDDEMKGRIIGKEGRNIQALQRETGVDILVDDTPGMIVLSSFDPVRRQ
VARLSLEMLMKDGRIHPARIEEVVAKAKKQIDKEVRQAGEDAMRETGVVGIPKEMLLLLG
ELKFRTSFGQNVLKHSTEMAQIAGMIAEEIGADVRITKIATLLHDVGKAVTHKIEGKHHH
IGAELARKYGMDERIVHAIEAHHDDIEATTPEAIIVRVCDAASAARPGARNVSAENFAER
MRDLENVATSFEGIDKAYAISAGREVRVIVKPQSIDDLSAIKLARDIATKIESTMQYPGT
IKVNVIRETRAIEFAK
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgatagaagtagttattgccgcggctgttggggctggtacgggtgttgctggtcttgta
ggatatcaacgaacgcgccaaattaatggcaaaaatcaaattgagcgtgatttggctgac
gccaagacgaaggctagtgatattgtcttaaaagccaaagacgaggcgctgaaaattgag
aatgagcgccgtaaagagtggcaaaaaaccgagaatcgtttggcggatcgcgagagaacg
cttgacaataaactagaggaattggatcgtcgagcagagaagttacggacacacgaagat
gaggttgataaccttaaaaatgagattcgtgatatccgtacgcgtcagcaggagaagctt
gaaaaaattgctggactgaaaaagaaagacgcagccgacaagctgatgcagatgactgag
cgtgatattaagcaggatttggctggtttggtgtcaaaattgcaacatgatgcaatggat
gacgccgaagagcgggcgcagatgattttggtgacagcaatggagcggatgagcagcgaa
gtgacagccgagcgcacagttactgcggttaagttgactgatgatgagatgaaaggtcga
attatcggtaaggaaggccgcaacattcaggccttgcagcgtgaaactggtgttgatatt
ttagtggatgatacgccaggtatgatagtgttgtcgagctttgatccagttcgtcgacag
gtggctcgtttgagtttggagatgttaatgaaggacgggcgcattcatccagcgcgcatt
gaggaagttgtcgctaaggctaaaaagcaaattgataaagaggtcaggcaggctggtgaa
gatgctatgcgcgagactggcgtggtcggtattccaaaggaaatgttgttgctgcttggt
gaactgaagtttcgtactagctttggccagaacgttctgaagcactcaacggagatggcg
caaattgctggtatgattgctgaggaaattggtgcggatgtgcgtattacaaaaattgct
acgctgttgcatgacgttggcaaggcggtgactcataaaattgagggcaagcatcatcac
attggcgcggaattagcgcggaaatatggcatggatgagcggatcgtgcacgcgattgag
gcgcaccatgatgatatcgaggcaactacaccagaggcgattatcgttagggtttgtgac
gcagcttcagccgcccgtccgggtgcccgcaacgtttcggctgagaactttgctgagcga
atgcgtgatttggagaatgtggcgactagctttgaaggaatcgataaagcctacgcaatt
tcggctggacgtgaagttcgagtgatcgtcaagccgcagtcaattgatgatttgtcggca
attaaattggcccgagatattgccacgaagattgagtcgaccatgcagtatcctggcaca
atcaaggttaatgtcattcgcgaaacgcgagcaattgagtttgcaaaataa

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