Candidatus Nanosynbacter lyticus: TM7x_03170
Help
Entry
TM7x_03170 CDS
T03502
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
sox
Candidatus Nanosynbacter lyticus
Pathway
sox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TM7x_03170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sox03400
]
TM7x_03170
Enzymes [BR:
sox01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
TM7x_03170
DNA repair and recombination proteins [BR:
sox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TM7x_03170
RecFOR pathway proteins
TM7x_03170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
AJA06610
UniProt:
A0A6S4GRH9
LinkDB
All DBs
Position
complement(591280..591753)
Genome browser
AA seq
157 aa
AA seq
DB search
MRIIGIDPGTGILGFGVIDFSGGKFKLVTAGVVRTPAHTPIDERLEEIFDSLTEIITETK
PDVMSIEKLFFARNVTTAISVAEARGVAMLTGRKAGLPIAEYTPLQIKQTLTGYGKADKK
QVQEMVRLNLGLKDVPKPDDCADALAAAITHAAMNRV
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgagaattattggtatcgatccaggcacaggtattttgggctttggtgtgattgatttt
tcgggcggtaagttcaagctggtcactgcgggtgtcgtcagaacaccagctcatacgccg
attgatgagcggctggaggagatttttgacagtttgacggagattattacagagactaag
cctgatgtgatgtcgattgaaaaattgttttttgcgcgtaacgtgacgacggcaatttcc
gtggcagaagcgcgtggcgtggcgatgttgacgggccgaaaggcagggctgccgattgcc
gaatatacgccgctacagatcaaacagacgttgacgggctatggcaaggctgataaaaag
caagtccaggaaatggtgcgcttaaacttgggactaaaggatgtgccaaaaccagatgat
tgtgctgatgctctggcggcggcaattacccacgcagcgatgaatcgggtataa
DBGET
integrated database retrieval system