Sitophilus oryzae (rice weevil): 115874354
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Entry
115874354 CDS
T07985
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
soy
Sitophilus oryzae (rice weevil)
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soy03021
]
115874354
03036 Chromosome and associated proteins [BR:
soy03036
]
115874354
Transcription machinery [BR:
soy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
115874354
Chromosome and associated proteins [BR:
soy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
115874354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Tex_central_region
SH2
HHH_9
Tex_YqgF
Spt6_S1
S1
HHH_3
Tex_N
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
115874354
NCBI-ProteinID:
XP_030745335
UniProt:
A0A6J2X2X7
LinkDB
All DBs
Position
Unknown
AA seq
1779 aa
AA seq
DB search
MADFIESEAEESSEEEELEPHERKKLKKVKAMDDSSEEEDDDDDKLREELHDLIDDNPIE
ESDGEDSDASGGEKRKKSDDEDLDDRLEDDDYDLLEENLGMKVERRKFKRLRRIQDEESE
GEDENDADQEREHIAMDLFSEDDDERRSERSHRPAAEQEQFGEEEEEGEYSDTDDFIVDD
DGKPIVRTKKKKIFSDAALQEAQETFGVDFDYDEFSKYDDEYDEEEDDEEDEYEEDEEGE
RRHRQKKAGKKRPTKKSIFEVYEPSELKRGFFTDLDNEIRNTDIPERMQLRDVPLMAVPD
DSTELDEEAEWIYKQAFCKSTISNTDAHLSQEAREKQRKGPQTIGKIRKALDFMRNQQLE
VPFIAFYRKEYVQPELNINDLWRVYKYDAKWCQLKTRKENLLALFEKMRSYQIEQLMKNP
DAAIPDNVRVMKDSDIERLKNVQTTEELNDVHNHFILYYAQDLAAMHAAWRIKEKERKKQ
EKREARLKALAEAEDGAEIPDEIPEDEDDDEPEPETIKYANRSGSYALCSKAGLDTLAKK
FGLTPQHFAENLRDNYQRHDVDQEPTEPAEVAKEFLSAKFQTVEEVLQATTYMVALQIAR
EPLVRKCVREAFYERAKLSVAPTRKGQKVIDEAHSCYSMKYLKNKPVRDLTSDQFLKLTL
AEEEQLIKIKISDTIEGHTTNSYVDEVKQLYIRDEFSKNVQEWNKLRAECVERALTRCIF
PDLQSEIKRILLAEAKEFVLRACCRKLYNWIKIAPYQVEFPEEDEDEWDTAKGIRVMGLA
YVPDYSQSAFTCIAAPDGDITDYLRLPHILKRKNSYRQEEKLMKEADLTALRNFIYTKKP
HVIAIGGESREALMIADDLRGIINDLVEAEQFPTLKVEIVDNELAKVYANSNKGTADFRD
YPELLRQAISIARKMQDPLIEYSQLCNGDEEILSLRFHPLQEQIGKEELLEALCLEFVNR
TNEVGVDVNLAVQQAHKSHLIQFLCGLGPRKGQALLKVLKQTNQRLENRTQLVTACHMGP
KVFINCSGFIKIDTNSLGDSTEAYVEILDGSRVHPETYEWARKMAVDALEYDDDEGANPA
GALEEILETPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNSRYKDLRTPYRSANP
EELFDMLTKETPETFYIGKLVQASVIGIARRKPQGEQLDSANPVRNDETGLWQCPFCLKN
DFPELSDVWNHFDAGSCPGQATGVKLRLDNGISGYIYIKNLSDKTVSNPEERVGIGQLIH
CRIMKIDVERFSVDCTSKSSDLLDKNHEWRPPRDPYYDQEQEDKDNRTEAEKKKDKQKQT
YIKRVIVHPAFHNISYAEAEKCMVNMDQGEVIVRPSSKGVDHLTITWKVADNIYQHIDVK
EEGKANAFSLGKSLWIANEEFEDLDEIIARYVNPMASYARDLLYFRYYKDTEGGLKDKAE
EFLKEEKKKNPAKIHYVISAAKSFPGKFMLSYLPRNKVRHEYVSVTPEGFRFRQQMFDSV
TSLFKWFKEHFRDPIPGGTPSTPRLGSGRTPYQGTATTPFNGMNPEAIQRVAQNLPTHML
QSLSAVANQTPHYPHTPGGAYGANYINTPYTPSGQTPFMTPYTQQTPRYGQATPSPVPAG
MASGPFLHPGAVTPSHRTPNSYRNLPSQSPMITASPVPSPASQSSYSSQSRRSAPRSGPI
PGYGTGAYANSEQMDWQKAAEAWAARSRTTPRSDSGRITPRGSTGLRTPKFDDIRADLER
TKMKNVGKSPKSLRSTPRTNMSPHSMSLGDATPLYDENI
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttattgaatccgaagcggaggaaagcagcgaggaggaagagttagagccc
catgaaagaaagaaactaaaaaaagttaaggcaatggatgatagctctgaagaggaagac
gatgatgatgataaactacgtgaagaacttcatgacttaattgatgataatcctattgag
gaaagtgatggtgaagattcagatgcatctggtggagaaaaaaggaaaaaatcagacgat
gaagacttagatgaccgacttgaagatgatgactatgatctacttgaagaaaatttaggc
atgaaagtagaaagaaggaaatttaagagattaagaagaattcaagatgaagaaagtgaa
ggtgaagatgaaaatgatgctgaccaagaaagggaacatattgctatggacttattttct
gaagatgacgatgaaaggcgctccgaacgtagtcatcgaccagcggccgaacaagaacaa
tttggtgaagaggaagaagaaggtgaatactcagatactgatgattttatagtagacgac
gatggaaaacctatagtaagaacgaagaagaagaaaatattttcagatgcggctttacaa
gaggcgcaagaaacttttggtgttgattttgattatgatgagttttctaaatatgatgac
gaatatgatgaagaagaggatgatgaagaagatgaatatgaagaagatgaagaaggagaa
agaaggcatagacagaaaaaagctggtaaaaaacgtccaactaaaaaatcgatatttgaa
gtttatgaaccatcagaacttaaaaggggatttttcacggatttggacaatgaaatacgt
aatacagatattcctgagagaatgcaactaagagatgttcctttaatggctgttcctgat
gattcaactgaacttgatgaagaggctgaatggatttataagcaagcattttgtaagtca
actatttcaaacacagatgcgcatttgagtcaggaagctagagaaaaacaacggaaagga
ccccaaactattggcaaaattaggaaagctttggactttatgcgtaatcagcaacttgaa
gtaccatttatagcattttatagaaaggagtatgttcaacctgaacttaatatcaatgat
ttgtggcgagtgtacaaatacgatgcaaaatggtgtcaattaaaaactaggaaagaaaac
cttttggctctctttgaaaaaatgaggtcctatcaaatagaacaattaatgaaaaatcca
gacgctgctattccagataatgttagagttatgaaagattcagatattgaaagattgaag
aatgttcaaacaactgaggaacttaatgatgttcataatcattttatcttatattatgct
caagatcttgctgctatgcatgcagcttggagaataaaagaaaaagaaaggaaaaaacag
gaaaaacgtgaagcacgactgaaagctttagccgaagcggaagacggagctgaaatccct
gacgaaattcctgaagacgaagatgatgatgaacccgaacctgaaactataaaatatgct
aatcgttcaggctcttatgcattatgtagcaaagctggcttagatacactagcaaagaaa
tttggtttaactcctcagcatttcgctgaaaatttacgtgataactatcaacgacacgat
gttgatcaggaacctacagaaccagcagaggttgcaaaagaatttttgtcagccaaattt
caaactgtggaggaagtacttcaggcaacaacatatatggtcgctttacaaattgctaga
gaaccattggttcgaaagtgcgtaagggaggcgttttatgaacgagctaaattaagtgtg
gcgcctacaagaaaaggacaaaaagttattgatgaagctcattcttgttatagcatgaaa
tatttgaagaataagccagtaagagatctaactagtgatcaattcctgaaactcacatta
gcagaagaagagcaacttataaaaattaaaattagtgacacaattgaaggacatacaaca
aattcatatgtcgatgaagtaaaacaactctatattagggacgaattcagtaagaatgtt
caagaatggaacaaacttcgagcggagtgtgttgagcgtgctttgaccagatgcatattt
ccagacttgcaatcagaaattaaaagaattctactagcagaggcaaaggaatttgttcta
agagcttgttgccgaaagttatataactggatcaagattgccccatatcaagttgaattt
cctgaggaggatgaagatgaatgggatacagctaaaggtattagagttatgggcctggct
tatgtcccagactattctcagtcagcttttacttgtatcgccgctccagatggtgatata
acggactatcttcgtttaccgcacattttaaaaagaaagaacagttatcgccaagaagaa
aaattgatgaaagaggccgatttgacggctctacgaaattttatctacacgaagaagcct
cacgtcattgcaataggtggagaatccagggaagccctgatgatagcggacgacttgaga
ggaattataaatgatttagtcgaagcagaacagtttccaaccctgaaagtagagattgtg
gataatgagctggctaaagtctacgcgaattcaaacaaaggcacggctgattttagagat
tatcctgaacttttgagacaagctatttccattgctagaaaaatgcaagaccctttaatt
gaatactcccaattatgcaatggagatgaagaaattcttagcttacgttttcatccttta
caggaacaaattggcaaagaagaacttctggaagcgctttgtcttgagtttgtcaacaga
acaaatgaagttggcgtagatgtaaatttggctgtacagcaagctcacaaaagccactta
atccaatttctatgtggtttggggccgagaaaaggacaagccctcttgaaagtgcttaag
caaacaaaccaaagattagagaacaggacccaacttgttacagcttgccatatgggtcct
aaagttttcattaactgctcagggttcattaagattgatactaacagtttgggagatagt
acagaagcgtacgtagaaattctagatggatctcgtgtgcatccagaaacgtacgaatgg
gcccgtaagatggccgttgacgctttggaatatgacgatgacgaaggagccaacccagct
ggtgctttagaagagatcctggagacgcctgaaagattgaaagatcttgacctcgacgca
tttgctgaagaactggaacgtcaaggatttggaaacaagagcattactctatacgacata
agagcggaattaaactctagatataaagatttaagaacaccttacagatccgcgaatcca
gaagagttatttgatatgttaactaaagaaacaccagaaacattttacatcgggaaatta
gtacaagcttcggtaataggaatcgctaggagaaaaccacaaggcgagcaactggattca
gccaatccagtccgtaacgatgaaactggactgtggcaatgtccattctgtttaaagaat
gattttccagaattatcggatgtatggaaccactttgatgctggttcttgcccagggcaa
gctactggggttaaattgagattagacaatggtatttctggctatatttatattaaaaat
ttaagcgacaaaaccgtttccaatccagaagaacgcgttggaattggacaacttatacac
tgtagaataatgaaaatagacgtagaacgattctccgtggattgtacatcaaaatcaagt
gatttgttagataaaaatcacgaatggagacctcctagggatccatattatgaccaagaa
caggaagacaaagataacagaactgaggcagagaagaagaaagacaaacaaaaacaaact
tatattaagagagtaattgttcatccagcttttcacaatatatcttatgccgaagcggaa
aaatgtatggtcaatatggatcaaggcgaagtgatagtaagaccgtcaagtaaaggtgtt
gatcatttgacaatcacttggaaagtggccgataacatttaccaacacattgatgtaaaa
gaagagggtaaagctaacgcattttcattaggtaaatctttgtggatagcaaatgaggag
tttgaagacctggatgaaattatcgctagatatgttaacccaatggcatcctatgctcga
gatttgctttattttaggtattataaagatacagaaggaggtttaaaagataaggcggaa
gagtttctgaaagaagagaaaaagaaaaatcctgccaagatacattatgtcataagcgca
gcaaaaagttttccagggaaattcatgttatcttatttacctagaaacaaagtgagacac
gaatatgttagcgttactccagaaggatttagatttagacaacaaatgtttgactctgtt
acgtcattatttaaatggtttaaagaacattttagagatccaatacctggcggtacaccc
agtactcctcgattgggatctggtagaactccatatcaaggaactgctacaacgccgttt
aatggaatgaatcctgaggctatacagagggttgcacaaaacctaccaacccacatgtta
caaagtttgtcggcagttgccaatcaaactcctcattacccacatacgcctggaggtgct
tatggagcgaactatattaacacgccatacacacctagtggacagacaccttttatgact
ccatatacccaacaaacgccaaggtatggtcaagcaacaccatctcctgtacctgcagga
atggcgtctggaccatttttgcacccgggagctgtcactccttctcacagaactcccaat
agttatcggaatctaccaagtcagtctcccatgataactgcaagtcctgtaccaagtccg
gcgtcacaaagttcatattctagccagagtcgaagaagcgcaccaaggagcggcccaata
ccgggatacggaactggagcgtatgccaattcagaacaaatggactggcaaaaagcagca
gaagcttgggctgctagaagtagaactactccaaggagtgatagtggtaggatcactcct
agaggttctactggtctaaggaccccaaaattcgacgatattcgagccgacttagaacga
accaaaatgaagaacgtagggaaaagccctaagtccctacgttctacacccaggacaaat
atgtccccccatagcatgtctctgggagatgctactcctctttacgatgagaacatttga
DBGET
integrated database retrieval system
