Sitophilus oryzae (rice weevil): 115875017
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Entry
115875017 CDS
T07985
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
soy
Sitophilus oryzae (rice weevil)
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soy04121
]
115875017
Ubiquitin system [BR:
soy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
115875017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
115875017
NCBI-ProteinID:
XP_030746200
UniProt:
A0A6J2X5C8
LinkDB
All DBs
Position
Unknown
AA seq
1841 aa
AA seq
DB search
MARQGAQGPPQGPVDLEDEMIDWDDRGGGDIAGDRFSFEDSDRFEEDSMCSWSTEPESVC
NNWRGWKKPSSNAGIFTNGKRGSEEAFAVPSLTELTAKCVASHIPFELVEHVYPPVPEQL
QLRIAFWSFPDNEEDIRLYSCLANGSADEFSRGENLHRNHMVKDPLQIGFHLSASVQQAR
YNNSSTPTHNVAVTFDRRRISSCNCTCQSQAYWCSHVVAVCLTRIHWPHLVTLRAPVSES
LSRLHREQLQKFAQYLISELPQQILPTAQRLLDELLGSQPSAINSVCGAPDPTAGASAAD
QTSWYLDEKTLHDNIKKILIKFCVPAPMVFSDVNYLSTVAPPAAAEWSSLLRPLRGREPE
GMWNLLSIVREMFKRNDRNAVPLLEIITEECMACEQILIWWFNTKVALLSGNSGHGGSGG
GKHNNINSNTHASQHAGSSLCDEVVILWRLAALNPGLAPSERDMLHSQFTTWHMKILEKV
SKCRNTNSSSTSNYYKNASSLKADLDIFTGFKPAIEACYLDWDDYPMPGITYTSDINPMY
HCPFTCFRHGPDSARGESQVTQVNSSKAVLNGDQITHTGHSHHHLHHRHHHHLFRNHRFE
YVNVMSLNPVEYSPHHPHITQLNERDGNRSSVSSEGFCEVDDDINILQVPSYNDSDSQEG
GGSDSSSSSSSRDTNTPPTRQITNPQASNIDQKQPGSKTPVNEPNSDPNWSGNEPPPSTD
TEEESRRQSKDESSSSLDSPNSGDEYSVYFYNSKEANGGEPVAGSSGQCPASGGMPVDQV
DGKTDVFSEIRRCNDPWDVLFARAEGLHAHGHSKEACILGVKLAEELLANPPNLMIEVPQ
IPKKKGKKPQLNPATHQLSVLASGTLAKGAFLCSVLSENPEHFHLAFRVGMFGLEMARPP
ASTKPLEVKLANQEADLVNLLKRLPLGHKELQILRERAEQIKDGTLKSRGEAMLPIMLAS
FIFDALVIPSIVGRDRSKIISLRLPTDEPLAFEAAVVALGLKANVSEADHPLLCEGTRRQ
RGELAITLLTFYKDYCYKICRIMEKLLDREIHQLLKTPLLSSYYTNNPPIRSQYNHLRRE
ECDSTIASINPFVPPSEMIPTDANCCSRPHSSTSAEVEQGMTNLSLAGPSGQISQGAISR
TKEGRYKKRAYPSIPNQPSEAGAHFMFELAKTVLTKAGGTSSTSLFTQPSTSQSHHGPHR
ALHMCAFQLGLYALGLHNCVSPNWLSRTYSSHVSWITGQAMEIGAAAISFLIDTWEGHLT
PPEAASIADRASRGCDINMVSAAANLALSVLPHSHALNPNEIQRAILQCKEQSDDMLEHA
CLTVESAAKGGGVYPEVLFQVAKYWYELYIRHTPGGEQLIDNDIPPHEALMDPHAQLVAL
IEQPVTQEGSPAAAPVVVTTAPPPYPHATPPVGMYVSHYNFVPAHPTGAPIGYAGPLQPI
PTATQHVHVQYQFPYPPPPPPGAQALPPFPPPNVGQATYAGLPPPPTPPQVVPVLFSVDS
RQTHDLEDSRFQVPFSTTPTTSQYVSPPTSQYAAPPPQYVAPTITATHQQPPPVVYSSPP
PAGASGPATSAHQPQLQYFGSAPVALAQAPPPSSRPVAQQQQHIYAQQPVPAPPQGSTLV
HANAAVLPLTPFLRVGIAAPAATQQAMVRQHRPHQLNQVQLRYLLTAYRVGMLALDTLAR
RVHDDRPQAKYARNPPYGEDVKWLLRISKHLGSHYLHHFCVCAVNSIVSPFVLHDVAIEA
AQYLARNNPGLVMQHLRTALMPLVTKCQQMYIQCMHQKLYHLTSADYEDFVSIVCAARAA
FQITPEGTTQFKEWLSSIRRSKSCKKDLWTQINTALQANSK
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atggctagacaaggggctcaaggaccccctcagggcccggtcgacttggaggacgaaatg
atcgactgggatgacagaggcggaggtgacatcgcaggggacaggtttagttttgaagac
tcagataggtttgaggaagactctatgtgcagctggagtactgaacctgagagtgtatgt
aacaattggaggggatggaaaaaacctagctcgaatgctggaatttttaccaatggtaaa
agaggctcagaagaagcttttgcggtgccttcattgacagaactgacagctaaatgtgtc
gcttctcatataccgtttgaactggttgaacatgtatatccccctgttcccgaacagtta
caattaaggatcgctttttggagtttcccggacaatgaagaagacatccggctatattct
tgcttggcaaacggttcagctgatgaattttccagaggtgaaaaccttcacagaaatcac
atggtcaaagatcctttacaaattggttttcatttgtcggcaagcgtgcaacaggccagg
tacaataacagctcgacccctacgcacaatgtagctgtcacatttgacaggaggcggatt
tcttcatgtaattgcacgtgccagtcgcaggcttattggtgctcgcacgtggtggccgtg
tgtctcaccagaatacattggccacatttggtgacactgcgagccccagtttccgaatcc
ctatcgcgactacaccgggagcagttacagaaattcgctcagtacttgatcagcgaactg
cctcagcaaattttgccaaccgctcagagattactagacgaattattgggatctcagcct
tcggctattaattctgtatgtggggctcccgaccccactgccggggcttcggcagccgat
cagacatcttggtatttggacgagaagacccttcatgacaatatcaagaaaattctgatc
aagttctgcgtgccggcgcctatggtgttcagcgatgtgaactatttgagcacagtggcg
ccgccagcggcggccgaatggtcttctttattgcggcccctcagaggcagagaacccgaa
ggcatgtggaaccttttgagcatagttagagaaatgtttaagcgtaatgacagaaatgct
gtaccccttctagaaatcatcaccgaggaatgtatggcctgcgaacaaatccttatatgg
tggtttaatacaaaagtagctctactgagcggaaattccggtcatggaggctcgggagga
ggaaaacacaacaacataaatagcaatactcacgcctcacaacacgcaggttcctcatta
tgcgatgaagttgtaattctttggagactcgccgccttgaatccagggttggcaccatcg
gaacgagacatgcttcacagccagttcactacgtggcacatgaaaatcctggagaaagtt
tcaaagtgccggaatacgaattcttcgtccacgtcgaattattacaagaacgcgagttct
ttgaaggccgatctggatatttttaccggatttaagccggctatagaagcttgttatttg
gattgggacgattatcccatgcctgggattacgtatacgtcggatatcaatccgatgtat
cattgtccgtttacttgtttcaggcacgggcctgatagtgccagaggcgaaagtcaggtg
acccaagtgaactcatccaaagcggtactcaacggcgaccaaatcacccacacgggccat
tcccatcaccatttacaccaccggcatcaccaccacctgttccgcaaccaccgcttcgag
tatgtcaacgttatgtccctcaaccccgtggaatactccccccatcaccctcacataact
caactcaacgaacgcgacggtaacagatccagcgtgagcagcgagggattttgtgaggtc
gatgacgacatcaacatactccaagtccccagttacaatgactcagactcgcaggaaggt
ggtgggagtgactcttcttcgtctagtagcagtagggatactaatactccacctacacgt
cagattaccaaccctcaggcttcgaacatcgatcagaaacaacctggctcgaaaacgcca
gttaatgaacccaattccgacccgaattggtcaggaaatgaacctccaccttcaacagat
accgaggaagagtcgagaagacagtcgaaagatgagtcttcgagttctctagactctccg
aactccggggatgaatatagtgtgtatttctataattccaaggaggcgaatggtggggag
ccagtagcggggagttctggacagtgtccggcgagtggtgggatgcctgtggaccaggtg
gatgggaagactgacgttttttcggagattcggagatgtaacgacccgtgggatgtgttg
tttgctagggcggaaggactgcacgcgcatgggcacagtaaagaagcttgtattttggga
gtaaaactagccgaagaactgttagctaacccgccaaacctcatgatagaagtacctcaa
atcccgaagaaaaaaggcaaaaaacctcagctcaacccagctacacaccagctcagcgtt
ctagcttcgggaaccttagccaaaggcgcttttctttgctcagttttatcggaaaacccc
gagcatttccatctggctttcagagtgggaatgttcggtttggagatggccagacctcct
gctagcactaagcctttggaggttaagttagctaaccaggaagctgatttagtcaacttg
ttgaagaggctgcctctgggacacaaagagctacagattttgagggaaagagctgaacaa
atcaaagatggtactttgaagtctagaggtgaagcgatgttgccaataatgttggctagt
tttattttcgacgctttggttattccttcgattgtaggtcgggataggtcaaaaatcatc
agtctccgcctacccactgatgaacctttagcctttgaagcggctgtggtggccttaggt
ctaaaagccaacgtatccgaggcagatcatcctttactttgtgagggtacaagaagacag
agaggagaactagcaataactctactaactttctacaaagactactgttacaagatttgc
cggattatggagaaacttttggacagggaaattcaccagcttctaaaaacgcctcttctc
agctcgtactacactaacaatccaccaatcagaagccagtacaatcacctacgcagagaa
gagtgcgacagtaccatagcttcgataaatccgtttgtaccaccgtcagagatgattcca
actgatgccaattgttgtagtagacctcatagttcgaccagtgccgaggtggaacagggt
atgactaacctttctttggctggtcccagtggtcaaatatcgcagggagctatttcaagg
accaaagagggccggtacaaaaaaagggcgtacccttccattcccaatcagccctcggaa
gctggagctcattttatgtttgaattggccaagacagtactgacaaaagctggtggtaca
agcagtacctctctcttcacccaaccctcgacgagccagagccaccacggtccccatcga
gccctgcacatgtgcgctttccaactaggtctctacgccctaggcctacacaattgcgtc
tcccccaactggctgagccgcacctacagttcgcacgtctcctggatcaccggccaggcg
atggagatcggtgccgctgccatatcttttctcatagatacctgggagggtcacctaaca
cctccagaggccgccagcatagctgacagggcgtcaagagggtgtgacattaatatggtc
agtgctgcggctaatctagcgttgtctgtgcttcctcattctcatgcactgaatccaaat
gagatacagagggcgatattgcagtgtaaggagcagagcgacgatatgttggagcatgct
tgtttgacggtggagagcgctgctaaagggggtggagtatatccggaggtgttgttccag
gttgcgaagtactggtacgagttgtatattaggcatacgccgggtggggaacagttgatt
gataacgatataccgccgcacgaggcgctgatggatccgcacgcgcagctggttgccttg
attgaacaaccagttacacaggaaggatctcctgcggctgcgcctgtggttgttacaacg
gctccgccaccatatccacacgccacacctcccgttggcatgtacgtgagccactacaat
tttgtaccagcccatcccacaggcgcccctataggctacgcaggtccacttcaaccaatc
cctacagcgacgcaacacgtacacgtgcagtaccagttcccctatcctccccctccacct
cccggcgctcaagccctgcccccttttccccctccaaacgtcggacaagcgacctacgcg
gggttgccacctcctcccacgccgcctcaggtagtgccggtgttgttttccgtggattct
aggcagactcatgacttggaggactctcgattccaggtacccttttcgaccacgcccacg
acgtcccagtacgtctctccccccacgtcacagtacgcggcgcctcccccacaatacgtg
gcaccgacgataaccgcaactcaccagcaaccaccgcccgtcgtctactccagccctccc
ccggcaggagcttcaggtcctgccacttcggcgcaccagcctcagttacagtacttcggc
agcgcgcccgtggccttggctcaagcgccgcctcccagctcgcgaccggtggcgcagcag
cagcagcacatctacgcgcagcagccggtgcccgcgccgccgcaaggtagtactttggtc
catgctaacgcagccgttttaccgctgacgccgttcctgcgtgtaggtatagcggcgccg
gcggcgacgcagcaggccatggtgcgccagcacaggccgcaccagctcaaccaggtgcag
ctgaggtacctgctgaccgcgtaccgggtgggtatgctggcgctggacacattggcgagg
agggtgcacgacgacaggccgcaagcgaagtacgcccggaatccgccctacggggaggac
gtcaagtggttgttgaggatatccaagcatctaggctcacactatctgcaccacttttgt
gtctgcgctgtcaactcaattgtcagcccgttcgtgttacacgacgtggccatagaagca
gctcaatacctcgccaggaacaacccaggcctggttatgcaacatctccgcacagctcta
atgccgttggttaccaagtgtcagcaaatgtatattcagtgtatgcaccagaaactctac
catttgacctcagcagattatgaagatttcgtaagcattgtctgcgcagctagggctgct
tttcaaattactcccgaaggaacgactcagttcaaggaatggttatcgtccatcagaagg
tcgaaatcctgcaaaaaggacttatggacgcaaatcaacacggctcttcaggccaattcc
aaatga
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integrated database retrieval system
