Sitophilus oryzae (rice weevil): 115876901
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Entry
115876901 CDS
T07985
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115876901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soy03021
]
115876901
03036 Chromosome and associated proteins [BR:
soy03036
]
115876901
Transcription machinery [BR:
soy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115876901
Coactivators
SAGA/TFTC/STAGA complex
115876901
Chromosome and associated proteins [BR:
soy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
115876901
STAGA complex
115876901
TFTC complex
115876901
SAGA complex
115876901
SLIK complex
115876901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WD40_like
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
TFIID_NTD2
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
DUF7165
Toxin_21
Motif
Other DBs
NCBI-GeneID:
115876901
NCBI-ProteinID:
XP_030748804
UniProt:
A0A6J2XDE1
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MDDGRSEKHELKQNSHDKVKSVVAAYLNKRQFVDVKPRKSPRKVVLKQALLDNRISRCNS
ILFSFENDKDNTLLNEYGSMFQKFVYWLKDKIDTKQQCMDVEPLVGPLFCHLYLDLQDSG
QAQLANSFYMNHIAKVDESKCDETVRNLLKSIHNADLRAKFRSAKVVVDINAESLLLLRK
FVTQTCHVIFLHALQTWFELKTTKIKQQESCKTSVPKSDKFHEERQLIEVVNKDVNDELM
KLHNAIQSVQKLPLGLCNVGIVNSKFDISCGLIKRQAGLMAYAESNALLVKSIKALDPPF
GYEDLGHIKFTNHSRQIYCVSLSSNNDILCTGSADHTISIYSLKKLKILKKLLGHLGPVY
TIALSPDSKYLLSGSADTTARLWSLQTGRLLRVFAGHFQAITSVDFHPNTLYVATGSADR
NVRLWSLQKGDPVRLFHAARKEVYSVAFGPNGYLLAAASDDKVVRVYELASSKVVHEFRN
EESVTCLLWSSNSKELCGGTLSGVVKVWDCSLKDKEKEIKDERDHTRGKKYNDSIFRRNT
NGRILSLEFSLGTWACLTVPKLGHSPVDTS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggatgatggaagatctgagaagcatgaattaaagcaaaatagtcatgacaaagtaaaa
tccgtagtcgcagcgtatttgaacaagagacaatttgtcgatgttaaacctaggaaatct
ccaagaaaagttgttttaaaacaagctctattagataatagaataagtaggtgtaattct
attttattcagctttgagaatgacaaagacaatacattactaaatgaatatggttcaatg
tttcaaaaatttgtatattggttaaaagacaaaattgatactaaacaacagtgtatggat
gtggagccgttagttggacccttattttgccacttgtatctagatttacaggacagtggt
caagcccaattagctaattcattttacatgaaccatattgctaaagtagatgagtcaaaa
tgtgacgaaacagtaaggaatttacttaaaagcatacacaatgctgatctaagagcaaag
tttagatcagccaaggtagttgtagatataaatgcagaatccttattactgttaaggaag
tttgttactcagacttgtcacgtaatttttcttcacgcattacagacatggtttgagctg
aaaactactaaaataaaacaacaggagtcttgtaaaaccagtgtaccaaaatctgataaa
tttcatgaagaacgtcaattaattgaggtagtaaataaggatgtgaatgatgaattaatg
aaattgcataatgcaattcagtcagttcaaaagttgcctcttggcttatgtaatgttgga
atagtgaacagtaaatttgatattagttgcggattaatcaaaagacaggctggattaatg
gcttatgcagaaagcaatgcattgttggtaaagtccataaaagctttagatccaccattt
ggatatgaggacctgggtcatattaagttcacaaatcattctagacaaatttactgtgtt
agtctttcatcaaacaatgatattttatgtacaggatcggcagatcacactatttctata
tatagccttaagaaactcaagattctcaagaaattattagggcacctgggccctgtttac
accatagccttaagtccagattcaaaatatttattatcaggatcagcagatactacagcg
agattatggagtttgcagacaggcagactattaagggtatttgctggacattttcaggca
attacttcagttgactttcatccaaacactctttatgtagctactggttcagctgatagg
aatgtgcggctgtggtccttacaaaaaggagaccctgtcaggttattccatgctgccagg
aaagaagtttactccgtagcctttggtccaaatggatatctcttagcagccgcaagcgat
gataaagtagtaagagtatatgagttagcgtcttccaaagttgtacatgaatttagaaat
gaggaatcagtaacctgcttattatggtctagcaacagtaaagagctgtgtggtgggacg
ttatcaggtgtagtaaaagtttgggactgcagccttaaggacaaggaaaaagagataaaa
gacgagagagatcatacaaggggcaagaagtataatgattcaatctttcggagaaatact
aatggtcgaatactttctttagaatttagtttaggtacatgggcatgcctcactgttcca
aaactaggacattctcccgttgatacttcatag
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