Sitophilus oryzae (rice weevil): 115877076
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Entry
115877076 CDS
T07985
Name
(RefSeq) GATA zinc finger domain-containing protein 14
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115877076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soy03000
]
115877076
03019 Messenger RNA biogenesis [BR:
soy03019
]
115877076
04121 Ubiquitin system [BR:
soy04121
]
115877076
Enzymes [BR:
soy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115877076
Transcription factors [BR:
soy03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
115877076
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115877076
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115877076
Ubiquitin system [BR:
soy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115877076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Nup35_RRM_2
Peptidase_M16
zf-C3HC4_2
zf-CCCH_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
115877076
NCBI-ProteinID:
XP_030749010
UniProt:
A0A6J2XDH0
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MSVLNQSGEEQVECPLCMEPLEVDDLNFFPCTCGYQICRFCWHRIRLDENGGLCPACRKA
YSENPADFIPLSREQVAKLKAEKRQRDQQRKAKLTESRKHLASVRVVQRNLVFVVGLPPR
LADAEILKRHEYFGKFGKIHKVVINQSTSYAGSQGPSASAYVTYMKSDDALRAIEAVNNV
TIDNRIIKSSLGTTKYCSHFMKNQSCPKPDCMYLHEYGDPDASFTKEQMHAGKHQEYEKK
LHDELLARTKSQNGSVSSIESKGQNSKAIKESSGASNTSSTLNSKDNSGTNKESWPQLDK
DKKQEKEKGRKAKTKNASAESKNRDKSNGNNTSKSNGNESKIVQDKINTNPVSHSNSKIE
AKESDSDSSLQISENSSPSPSPSSTQTPPLETSTPPTIIENNTVNYSSSVPTTGTQFANS
SLSSKLSSSLIGDHLEDNSYFSSSGFSKLQNALDNLTDRKNKDELKIGEVEGSRVLGEML
QDDQNHQVLTDTLPAISTTEDWAAAFGFADQQLREHDLLQQKSPQRDVSNLSGFSSYGPL
GNHQDDSFTKGVDNFSGFYELSKLQENLMDALANKTNGYSVRPHESNTPHPNYISNGLDH
NMSKFFSDFHKYNSKEPPSPSPFQNGINGIHNPYHILPQKQLEEQLMNLGIKQNSFIGPQ
TTNYQNGVPTPSYSNGDSAVLNAGVNPLHNLYQKQQLISQQSQNSRNSEAELDFDPFQET
QKALAEMMANEQNHKTSTSGRTNTQQMNGYVQNNQNGNHIPPPPPGFLQQQQQTHMNSFG
SKILPFLNMSNSQQQQQQINNLPNGWSSNFNTQVQQQKNISNTDWKVLDPAILSSSRNSY
QLAQMPPPPVRDPYNNPAMLGTQQIAQNGLMRTAFDYQQQSQHNNSPFSTFTQQIQPNYN
TYTHINTQQNLSWFTNDLNSQISSPPGFRSSQATKQQEC
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgctaaatcaaagtggtgaagagcaggtggagtgtcccctttgtatggaaccg
ttagaagtggacgatttaaatttctttccgtgcacttgtggttatcagatttgccgtttc
tgttggcatcgaatccggctagacgagaacggaggtttgtgcccggcgtgccggaaggcg
tactctgaaaatcctgctgattttattccattgtctcgcgagcaggtggcaaagttgaag
gctgagaagagacagcgcgatcagcagcgtaaagccaaattaaccgagagcaggaaacat
ttggctagtgtcagagtagttcaaaggaatttggtatttgttgttgggttgccaccgaga
cttgcagatgccgaaatcctaaaacgccacgagtattttgggaaatttgggaagattcac
aaggtggttataaaccagtcaacatcgtacgcggggtcccaaggacctagtgcaagtgcc
tacgtaacctatatgaagagtgatgacgcattaagggctatagaggcggtcaacaatgtt
acaatagacaatagaataataaaatctagcctagggacaacgaagtattgttctcatttc
atgaagaaccagtcttgtcccaaaccggactgcatgtatcttcatgaatatggtgatcca
gatgctagtttcactaaagaacaaatgcatgcaggtaaacatcaggaatatgagaagaag
ctccacgatgagcttctggcaagaactaagtcacaaaatggatcggttagtagtatagag
agtaaaggacaaaatagtaaagctattaaagaatcttcaggagcatccaatacgtctagt
acattgaatagtaaagataatagtggtacgaataaagaatcttggccgcaattagataaa
gataaaaagcaagaaaaggaaaaaggcaggaaggcgaaaacgaaaaatgcctctgcagaa
tctaaaaatagggacaagagtaatggtaataacacttcgaaaagtaatggaaatgagagc
aaaattgtacaagataaaattaacacaaatcccgttagtcatagtaatagtaaaatagaa
gcgaaagaatcggattcagattcttcgttgcaaatttccgaaaactcaagcccgtcacct
tcgccctctagtacccaaactccgccactggaaaccagcacgccccctacaattatagaa
aataatacggttaattatagttcttcggtacctacgacaggaacgcaattcgcaaattcc
tcgctttcgtcgaagctgtctagtagtttgattggtgatcatctggaggacaactcgtac
tttagttcgagcggtttcagtaaattacagaacgctctcgataacctaacggataggaaa
aataaagatgaactaaaaataggcgaggtcgaaggatcgagagttttaggggagatgtta
caggatgatcaaaatcaccaggtattaactgacacattaccagcaatcagtaccacagaa
gactgggcagctgctttcggtttcgcagatcagcaactaagggaacacgatttgctccag
caaaaatcgccgcaaagagacgtcagtaatttatctggtttctctagttatggaccgtta
ggcaaccaccaagacgatagttttactaaaggagtggacaatttttctggattctacgaa
ctgtcaaagcttcaggagaatttgatggacgcattagcaaacaaaacaaatggatatagt
gttagaccgcatgaaagtaatacgccccatcctaactatatttcgaatggattagatcat
aacatgtcaaaattcttcagtgacttccacaagtataatagcaaggagcctcctagtcca
tctcccttccaaaacggtataaacggaatacacaacccctaccacatattaccacagaaa
caattagaagaacagttaatgaatctcggcatcaaacagaatagttttattggaccacaa
acgacaaattatcaaaatggagtccctacaccatcgtattctaacggagacagtgctgta
ctaaatgctggcgtaaatcctttacataatttatatcaaaaacaacagttaatttcgcaa
caatctcagaattccagaaactcagaggcagaactagacttcgatcctttccaagaaaca
cagaaggctttggctgaaatgatggcgaatgaacaaaatcacaaaacatctaccagtggt
cgaactaatacacaacaaatgaatggttatgttcaaaataatcaaaatggcaaccacata
cctccacctccccctggatttttacaacagcaacaacagacgcatatgaactcatttgga
agcaaaattttaccatttttaaatatgtcaaatagtcaacaacaacaacaacaaataaac
aatttgccaaatggttggtctagtaattttaatacacaagttcaacaacaaaaaaatata
tcaaatacagattggaaggtactagacccggcaatcctatcttccagtcgcaacagttat
caattagctcaaatgccaccacctccagtgagagatccttacaacaaccctgccatgtta
ggaacccaacaaattgcacaaaacggcttgatgagaacggccttcgactaccagcaacag
tcacaacacaacaacagtcccttttccacatttacgcaacagatacagccgaattacaat
acatacacacacataaatacacaacaaaatttgagttggttcacaaacgacttgaactca
cagatatcgagcccacccggtttcaggagtagtcaggcaaccaaacaacaagaatgctag
DBGET
integrated database retrieval system
