Sitophilus oryzae (rice weevil): 115877084
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Entry
115877084 CDS
T07985
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03018
RNA degradation
soy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115877084
09123 Folding, sorting and degradation
03018 RNA degradation
115877084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115877084
03041 Spliceosome [BR:
soy03041
]
115877084
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115877084
mRNA degradation factors
5'-3' decay
Lsm complex
115877084
Spliceosome [BR:
soy03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115877084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
DAHP_snth_FXD
Motif
Other DBs
NCBI-GeneID:
115877084
NCBI-ProteinID:
XP_030749023
UniProt:
A0A6J2XCG1
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MASGLDSFVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHERVYSTTSGIEQVMLGLH
IIRGDNVAIIGLIDEEIDNRLNLSNIKAEPLNPVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggattggatagctttgttaaccatactgtatcgattattacctcagatgga
cgtaattttattggcacgttaaaagggtttgaccagacaataaacattattcttgatgaa
tctcatgaacgagtttattcaacaacttcaggaattgaacaagtgatgttaggacttcat
ataatacgaggcgataatgtggccattataggattaatagatgaagaaatagacaataga
cttaatttatcgaatattaaagctgaacctttaaatccagttgtacattaa
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integrated database retrieval system
