Sitophilus oryzae (rice weevil): 115877164
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Entry
115877164 CDS
T07985
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115877164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soy03021
]
115877164
03041 Spliceosome [BR:
soy03041
]
115877164
03036 Chromosome and associated proteins [BR:
soy03036
]
115877164
Transcription machinery [BR:
soy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
115877164
Spliceosome [BR:
soy03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
115877164
Complex B
115877164
Complex C
U2 SnRNP specific factors
115877164
Chromosome and associated proteins [BR:
soy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
115877164
TFTC complex
115877164
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_LRRK2
Beta-prop_BBS7
Beta-prop_VPS8
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
115877164
NCBI-ProteinID:
XP_030749182
UniProt:
A0A6J2XD59
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
MHLYNLTLQRATAITHAIHGNFSGSKIQEIVIARGKSIELLRLDPNTGKIHTLLTIEIFG
IVRSMMPFRLTGGTKDYVIVGSDSGRIVILDYQPQKNCFVKVHQETFGKSGCRRIVPGQY
LATDPHGRVIFLGAIEKQKLAYILNRDDQTRLTISSPLEAPKSNTLVYHMVGVDVAFNNP
MFACLEIDYEEADSDPTGEAAQRTQQTLTFYELDLNVNHVVRKYSEPLEEHANFLITVPG
GDEGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATYKTKSSSA
VSKSKSMFFFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVATAMCVLKTGFLFVAS
EFGNHYLYQIAHLGDDDDELEFSSAMPLEEGDTFFFAPRQLQNLILVDEIESLSPILSAR
VADLAGEDTPQLYMLCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKNKSDDEYD
AYIIVSFINATLVLSIGETVEEVTDSGFKGTTPTLSCSALANDALVQIYPEGMHHIGPNK
KVNQWKDGKKSIVKCAVNQRQVVLALTGGELVCFEMDPTGHLHEYKERKRMDSEVLCMAI
GSVAPGEQRAWFLAVGLANDTVQIMSLDPADCLSSRAMQVLPACPESLCIVEMGGGGDTE
SSGAQAGSTLYLNIGLQNGALLIAVLDPVTGELTDTRTRYLGSRPVKLFRIRMQNSEAVL
AMSSRSWLSYYYQSRFYLTPLSYDSLEYASGFSSEQCPEGIVAISTNTLRILALEKLGAV
FNQISFPLEYTPRKFIVHPESSNLLILETEHNAYTEETKKQRRLQNAKEMKEAAGEDEQE
LAKEMAEAFLNEDLPENIFSAPKAGHGMWASTLKIMDPVGGNLYKCLRFEQNEAAMSLAL
VKFHGQPEHQWFLILGIAKDYQLNPRICTQGFLDTYRVDVMCRKLELVHRTPVDEVPMAL
CPYNGRLLAGIGRMLRLYDMGKKKLLRKCENKHIPNAIVNIQAMGKRIFVSDIQESVFMV
RYKRAENQLIIFADDTNPRWTTCTTVLDYNSVATADKFGNISIMRLPTNVSDDVEEDPTG
HKALWDRGLLNGASQKTETIATFHVGETVTWLQKATLIPGGSESLLYTTLSGTVGVLVPF
TSHEDHDFFQHLEMHMRSENPPLCCREHLAFRSYYFPVKNVIDGDLCEQYNSLEPAKQKS
IANDLDRTSAEVSKKLEDIRTRYAF
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgcatctatacaatttaacacttcagagagctactgcaattacccatgctattcacggc
aacttttccggatcaaagattcaggaaattgttattgcaagaggaaaaagcattgaacta
ttgcgattagatccaaacactggaaaaattcacacgttattaacaatagaaatatttggc
atagttaggtctatgatgccttttcggttgactggtggtaccaaggattatgtaattgtt
ggatctgatagtggtcgaattgttattcttgattaccaaccccaaaaaaattgctttgtg
aaagtacaccaagagacatttggtaaaagtggctgtcggcgtattgtacctggacaatac
ttggcgacagatcctcatggtagagttatatttttaggtgcaattgaaaaacaaaaactt
gcttacattttaaacagagatgaccaaactcgtcttacaatatcttctcctttggaagcc
cctaaaagtaatacattagtttatcatatggtaggtgttgacgtagcttttaataatcct
atgtttgcttgtcttgaaattgactatgaagaagctgattcagatcctacaggggaggca
gctcaaagaactcaacagacattaacattctacgagttagaccttaatgtaaatcatgta
gtacgaaagtattcagagccattagaagaacatgcaaattttttgataacagttcctggt
ggggatgaaggtccttctggagtacttatctgttctgaaaattatttaacatataaaaat
ttgggagatcaacatgatattcggtgtcctataccgagacgaagaaatgatttagatgat
cctgagaggggaatgattttcgtatgttcggctacatataaaacaaagtctagttcagca
gtgagcaaatcaaaatcaatgtttttctttttggcccaaactgaacaaggagatatattt
aaaattacattggaaacagatgaagatatggttactgaaatcaagttgaaatattttgat
acagtgccagtagccacagccatgtgtgtactaaagactggatttttgtttgtagcttca
gaatttggaaatcattatttgtatcagatagcccatctgggtgatgatgatgatgagctc
gagtttagttctgctatgccattagaagaaggagatactttcttttttgcacctagacaa
ttacagaatttgattttggtagatgaaattgaaagtctatctcccattctatctgccagg
gtggctgatttggcgggcgaagatactcctcaattgtatatgttatgcggcagaggacca
aggtcatcattaagagtgttgaggcatggtctagaggtatctgaaatggcagtttctgag
cttcctggtaacccaaatgcagtatggactgtgaaaaacaaaagtgatgatgagtatgat
gcatatatcatagtttcatttataaatgctacattggtgttgtcaattggtgaaacagtt
gaagaagtaacagacagtggtttcaaaggtacaactcctacactgtcctgttctgcttta
gctaatgatgctttagttcagatttatccagagggtatgcatcatattggtccaaataaa
aaagtcaatcagtggaaagatggtaaaaagtcgattgtaaaatgtgctgtcaatcaaaga
caggtagtgttagcattgacaggcggtgaattggtctgctttgaaatggaccctactggg
catctacatgagtataaagaacgaaaacgtatggattctgaggtgctttgtatggccatt
ggaagcgtcgctcctggcgaacaaagggcatggtttctggcagttgggttggccaatgac
actgttcaaataatgtcattagaccctgcggattgtctgtcttctcgtgcaatgcaggtc
ttaccagcttgcccggaatccttatgtatagtagaaatgggaggaggcggagatacagaa
agctcaggcgcccaggccggtagtactttatacttgaatataggcctacagaacggtgct
ttactaatagctgtattggatccagtaacaggagaattaactgacacgagaacaagatat
ttagggtctagacctgtcaagctgttcagaatacgaatgcaaaattcagaagcagtccta
gcaatgagtagccgatcgtggcttagttattactatcaaagtcgattttatttgacgcct
ctttcttacgatagtttggaatatgcctctggatttagttctgaacagtgtccagaagga
attgttgcgatctcgacaaatacattaaggattttagccttagaaaaacttggcgctgtg
tttaatcaaatatcatttccattagaatatacacccagaaaatttattgttcatcctgaa
tctagcaatcttctcattcttgaaacagaacacaatgcttacacagaagaaacaaaaaaa
caaagacgattacagaatgccaaggaaatgaaagaagcagcaggtgaagacgaacaagag
ttggcaaaagaaatggctgaagcatttttaaatgaagacttgcctgaaaatatattttca
gctcctaaagctggtcatggtatgtgggcttcaactttgaaaattatggatcctgttgga
gggaatttgtataaatgtttacgttttgaacagaatgaagctgctatgtcgttagcgttg
gtaaagtttcatggacagccagaacatcagtggtttttaatattaggaattgccaaagat
tatcagctaaatccccgaatctgtactcaagggttcttggatacttatagggtagatgtc
atgtgcagaaaactcgaattagttcatagaactcccgttgatgaagttccaatggctctt
tgcccatataatggtagattgctagcaggaattggaagaatgctaagactatatgatatg
ggcaagaagaaacttctaagaaaatgtgaaaacaagcatataccaaacgccatagtaaat
attcaagctatgggcaaaagaatattcgtatcagatattcaagaatctgtttttatggtg
cgatacaaaagggcagaaaaccaactaattatttttgccgatgatacgaacccaagatgg
actacatgtactacagttttggattataattcggttgctacagctgataaatttggtaat
atttctataatgagattaccaaccaatgtgagtgatgatgtagaggaagatcctactggt
cacaaagcattgtgggataggggattactgaatggggcatctcaaaagactgagaccata
gcaacttttcatgttggagaaactgtaacctggcttcaaaaagcaacccttattcctggt
ggtagcgagtcccttctatataccacattatcaggaactgtgggagtgctagtaccgttc
acttcacacgaagaccacgattttttccaacatttggaaatgcacatgcgcagcgaaaat
ccacctctgtgttgcagagaacatttggcatttagaagctactatttcccagttaagaat
gtgattgatggtgatctttgtgaacagtataattcgcttgaaccagccaaacaaaaaagt
attgctaatgatttagacagaacatctgcagaggtttctaagaaactagaagatatacga
acgcgatatgcgttctaa
DBGET
integrated database retrieval system