Sitophilus oryzae (rice weevil): 115877528
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Entry
115877528 CDS
T07985
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115877528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115877528
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
115877528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
115877528
NCBI-ProteinID:
XP_030749613
UniProt:
A0A6J2XE53
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MADDVENDDQWLYGDNPDGNPPEEEKQTTPEEAVSNDAVPPIEPSPINYPQEQSNDDRPP
GVEDENEEKENGEIDNEREDGELRQNGDDDEDLDDESDDDVNVVIGDIKTTTSYPQQVNI
KRGVLATAIVDKSKSVQQTGKFQVEEFEQIGTINGVPASDYNLDSLEDKPWRKPGADITD
YFNYGFNEDTWKAYCERQKRIRINESGVGIVPLNAIGLPRGSVSGNDNNKYPNQGFMQGS
NIRPIQTTTKANEPPKMNTIQVMTADRREYSRKPGFPDMSVPPPNSFSDPFPPPEYGFNP
EPEPFYGGYEPTQDSQWMDGPVNSSWQPSEIKTLTGGSPPRPGGHGMGPPPRGGRSPSRR
SSSRDRERDREREESRSRSVKPRDYEREKSRRRERSRSRSRRHRSRSRSPGHRSHKKKKS
RRHEDSD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgacgttgaaaatgatgaccagtggttgtatggagataatccagacggaaac
ccccccgaagaagaaaagcaaactactcctgaagaggctgtctctaacgatgctgttcct
ccgattgagccatctccaataaattatcctcaggaacaaagtaatgatgatagacctccc
ggtgtagaagatgaaaatgaagagaaagaaaatggagaaatagataatgaacgagaggat
ggggagcttagacaaaacggagatgatgatgaggatttagacgatgagagtgatgatgac
gtgaatgttgtaataggagatataaaaactactacttcttatccgcaacaagtgaatatt
aaaaggggtgttttggcaactgccattgttgataagagtaaaagtgtccagcaaacaggc
aagtttcaagtggaagagtttgaacaaattggaacaattaatggagttccagcgtccgat
tataatttagattctttggaggacaagccctggagaaaacccggtgctgatataacagat
tacttcaattatggctttaacgaagatacatggaaggcatattgtgaaagacaaaaaaga
attcgcataaatgaatcgggtgttggaattgtgccattaaatgctattggattaccgaga
ggttctgtttctggtaatgataataataagtatccaaatcagggctttatgcaaggatct
aatattagacccatccagacaactactaaagctaatgaaccaccaaaaatgaatactatt
caggtaatgacagctgacagacgagaatatagtaggaagccaggttttccagatatgtca
gtaccaccaccaaatagtttctctgacccttttcctccacccgaatatggctttaatcct
gaaccagaaccgttctatggtggttatgaaccaacacaagattctcagtggatggacggg
ccggtaaattccagttggcagccatcggaaatcaagacgctgacaggcggcagtccacct
agaccgggtggacacggtatgggtcccccacctagagggggtcgttcgccgagccggagg
agttcttcgcgagaccgagaacgcgacagggaaagagaggagagccgaagtcgttctgtc
aaacctagggactacgaaagagaaaaatctcgtcgaagagaacgatccagaagtaggtcc
agaagacatcggtcaagatctagaagtcctgggcatcgttctcacaagaaaaagaagtcc
aggagacacgaagatagcgattag
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