Sitophilus oryzae (rice weevil): 115878219
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Entry
115878219 CDS
T07985
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
soy
Sitophilus oryzae (rice weevil)
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soy03021
]
115878219
Transcription machinery [BR:
soy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115878219
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EF3_N
ResIII
Vac14_Fab1_bd
HEAT_EZ
TniB
Motif
Other DBs
NCBI-GeneID:
115878219
NCBI-ProteinID:
XP_030750496
UniProt:
A0A6J2XHA2
LinkDB
All DBs
Position
Unknown
AA seq
1836 aa
AA seq
DB search
MTSSSRLDRLFVLLETGSTSVTRSAAAKQLGEVQRLHPHELNTLLFRTASYLRSPSWDTR
IAASEAVRAIVNNVPQWNPRGIPDTIKEENGVSSQALSIVGRLQFEQFDMSKVLDNSTHL
MASEGKEFDVEEDSALGLDMKERLAKQRQLLNNRLGLDVAARMGFNTSALFSNEDLAVGI
EKIEQPHDYNSGIVKSLAESAAKTGLSSRRDEQGQRMARQAVNKQRSRDVGEDGQMNGDE
PERKKIKTEIKEENTVTVDVETSESCDWPLEWFCDQLSQDLFSSSWETRHGAATALREVL
SVHGRGAGKATYLPASQMELYHQMWLEDMSIRLLCVLALDRFGDFVSDAVVAPVRETCAQ
ALCAVIKLMDTRSCNCVLNILLQLLSHQDWEARHGGLLGLKYLLAVRVDMIDELLPKAFP
YILQGLSDTVDDVSSVAASSLIPVAPKLTELVLGSVPQVITKLWDLLSEQDELAAACNSF
MGLLAAILNLPQAQSLLPSQPLNDVVPRLWPFLSHSTSSVRKATLQTLCTLTERPADGSI
IFWEAQLLQDAMRHIFQRVLVEPIAEVRDVAEKVWSNLVKNSGLVELLHAACPFITVWLF
LTMQPIKVLFDNNLFIQAKTQRKTGNVLNNFDHTIGHSKYFIGGGETTPIATREANSVQV
RCMATRMLGLLSCYIVKPAPGLIYTQGIEKPIDCYEKVLLVHLNSKSALQRLVTGLVISE
WAKLNTEIQDCPPNLKQRLHQCQDEIIYFDEIAHSFTKLAQETRDFLATLRHYKVPIQIN
IDQPLTLPLIEHLTNSDTENILVSFKMKPKILESLQERRRSIQNSVVQTTNEQKSLTIST
KAALSGAIAMFRALPEKLNPVIKPLMDSVKYEPEELLQQVSAHHLAILLDQCRERDQCPN
EKVLTNLCTFLRCDPEYTPKIYTAQEQSEVQESWKRDNYNGIVTLINEQRNAECAMFRRS
NSTGRGPRRPPINEVPMEELLKDDEPQKLNRIQRRGASLALTAITSYFGSELPVKLPKLW
ELIVGQLVQTVDPQTFNPARDKDKEAQQLVWDLQVLEVTTPSLHASLLLPLMDLTLERLC
VLLSHPYRAVRHLAARCLAVFAKLSSVRVMELVVSKILPKLGATDCDTDRQGAVEAIACI
VDTLQFDIIPFVVLLVVPLLGRMSDQNSSVRLTGTHSFATLVQLMPLDGGVPEPPALKDS
VLSAKRDKEREFLQQLLCPSSIPNYVIPVPIAAELRSYQQAGVNWLAFLNKYKLHGILCD
DMGLGKTLQSICILAGDHYYREQKYRESKSADCSPLPSLVVCPPTLTGHWVYEVEKFVSH
KHLRPLQYNGNPVEREKLRGKFKKYNLIVASYDIVRKDNNFFSNIKWNYVILDEGHIIKN
GKTRTSLAIKHLVANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFTAKYSRPILA
SRDPKCSPKDQEAGVLAMEALHRQVLPFLLRRMKEDVLADLPPKITQDYYCELSPLQEQL
YEDFSKSQAHQTLQDSISSGATASSMQGNTHIFQALRYLQNVCNHPKLVLNPTHPQYQHI
IAQLKQHNSKLEDIAHSAKLPALKQLLNDCDIGTNLDNGIYKESEIVINQHRALVFCQLK
AMLDIIENDLFKKHMPNVTYLRLDGSVPPVMRHSVVTRFNNDPSIDVLLLTTQVGGLGLN
LTGADTVIFVEHDWNPMKDLQAMDRAHRIESERSCGDVYRLITRSTLEEKIIGVRKYTPC
YLEHSVYLNKFSDYKSSKAQTAANTVISXEFQYMETMGTEQLLDLFSNKPVISRGDSGSX
GKGNGIKAILESLPELWDLRQYDDETXFDQFMTKLQ
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagtagtagattggatcgactttttgtgctcttggagaccggcagtacctct
gtaactagatcagctgccgccaaacagttaggggaagtacagcggctacatcctcacgag
ctcaataccttgctgttcaggactgcctcgtacctgcgttcccctagctgggacacccga
atagctgccagcgaagccgtcagggcaattgttaataacgtgccccaatggaatcctcgg
ggaatacccgacactatcaaagaggaaaatggtgtatcatctcaagcattatcgatcgtc
ggaagactacagtttgagcagtttgacatgtctaaagtattagataatagcacacattta
atggcttctgagggcaaggagtttgacgtggaagaagattcagctttaggtttagacatg
aaggaacgcctagccaagcaaagacaactcctcaataacaggctgggcttagacgtggcc
gccaggatgggtttcaacacttcagctttattctccaatgaagacttggccgtaggcatt
gaaaaaatcgagcaacctcacgattacaattcaggaattgtaaagagcctcgcagagtct
gcagcaaagactggactgagcagtcgcagagatgaacagggccaaagaatggccagacaa
gcggtgaacaagcaaagatctcgtgacgtaggggaggatggacaaatgaacggggacgag
cccgaaaggaagaaaattaagactgaaattaaggaggaaaacaccgttacagttgatgta
gaaacatccgagtcgtgcgattggcctttagaatggttctgcgatcagctcagccaggac
ttgtttagttcaagttgggagacgagacatggcgctgccacagctttaagagaagtactg
agcgtgcacggtagaggagctgggaaggccacatatttaccagctagtcagatggaactc
taccaccaaatgtggctggaagacatgtcaatacggctcctttgcgtcctagctctagac
cgcttcggcgactttgtttccgatgcggtcgttgctcctgtaagggagacttgcgctcaa
gccctttgcgcagtcatcaaactgatggacaccaggtcctgcaactgcgtgctgaacatc
ctactgcagctactcagtcatcaggattgggaggcaagacatggagggttattggggctg
aagtatttgctggcagttagagtggatatgatcgacgagttacttcctaaggcttttcca
tatattttgcaaggtctctccgacactgtagacgatgtcagctccgtagcagcctcgtca
ttaattcctgttgccccaaaactaacagaattagtactgggttcagtacctcaggtaatc
accaaactatgggacttactatccgaacaagacgaactagctgctgcctgtaacagtttc
atgggcctgctggccgccattctcaatttacctcaagctcaatctctcttaccgtcccaa
ccgctcaatgacgtagtacctagactctggcccttcctttctcacagtacttcatctgtg
cgcaaggcgactttgcagacgctatgcacattgacagagcgtcctgctgacgggtccatt
atattctgggaagcccagctgttgcaagacgcgatgcgacatatttttcagagggttttg
gtcgagccaatagcagaggttagagacgtagcagagaaagtttggagtaacctagtaaaa
aactccggcttagtcgagctgctacatgcggcttgtccattcataaccgtttggttgttt
ttaaccatgcaacccataaaggtactatttgacaataacctgtttattcaagcaaaaact
caaagaaagactggaaatgtcctgaataattttgaccatacaatcggccattccaaatat
tttataggaggtggtgaaacaactcccattgcaacaagagaagctaacagcgtccaagtc
cgatgtatggccacgcggatgctgggattactatcctgttacatagtgaaacctgctcca
gggctgatttatactcagggcatagagaaaccaatagactgttacgaaaaagtactgctc
gttcatttgaattcgaaatctgcactacagagactagttacaggtctcgttatatccgaa
tgggccaaactcaacacagaaatccaagactgcccgcccaacttaaaacagcgcttacac
caatgccaagacgagatcatctacttcgacgaaatagcgcacagctttactaaactagct
caagaaacgcgtgatttcctcgccactctacgccattacaaagtccccatccaaatcaac
atcgatcaacccctaaccttacctctcatcgagcatctgaccaactcagacaccgagaac
attctagtcagtttcaaaatgaagcccaagatattggaaagtctgcaagaaagaagacgg
tcgattcagaactcggtcgtgcaaactactaacgagcagaaatcgctgacgataagcacg
aaagccgcgttatctggtgccatagctatgtttagagctttacccgaaaaacttaaccct
gtgataaaacctttgatggactctgtcaagtacgagcctgaagaattacttcaacaagtc
agcgcgcatcacctggccattttattggaccaatgtcgtgagagggatcaatgccctaac
gaaaaagtactcacgaatctttgtaccttccttagatgcgaccctgaatacactccgaaa
atatataccgctcaggaacaaagtgaggtgcaagagtcctggaaaagagacaactacaac
gggatagtgaccttgatcaatgaacagagaaacgccgagtgtgccatgtttaggaggtca
aacagtactggaaggggacctagaagacctcccatcaatgaggtgccgatggaagaactt
ctaaaagacgacgagcctcagaaactgaacagaatccaacgtagaggagctagtttagca
ctgacagctataacttcttactttggatcggaacttccggttaaattgccgaaactctgg
gaattgatagtaggtcagttggttcaaacagttgatccacaaacctttaatcctgctaga
gataaagacaaggaagcgcagcagctggtgtgggatttgcaggtgttggaagtgacaact
ccgagtttgcacgcctctttgctgttgccgttgatggatttgacgttggagaggttgtgt
gtgctgttgtctcatccgtaccgggctgttcgacatttggctgcaagatgtttggcggtg
tttgcgaagcttagttctgttagagttatggagttagtagttagtaagatattacctaaa
ttaggagccacagactgtgatacggaccgccaaggtgccgtcgaagccatagcttgcata
gtcgacaccttgcagttcgacatcatccccttcgtagtgctactcgtcgtacctttgctc
gggcgcatgtccgatcagaactcctccgtcagactaaccggcacccacagctttgccacc
ctggtgcaactaatgccattggacggaggcgttcccgaacctccagctttaaaagacagc
gtgctcagcgccaagagggacaaagaacgcgaattcctccagcagttgctctgtccttct
tcgataccgaactacgtcataccggtacctatagcggccgagttgaggagttatcagcaa
gctggggtgaactggttggcgtttcttaacaagtacaaactgcacgggatattgtgcgac
gatatggggttagggaagacgttgcagagtatctgtattttggcgggggatcattactac
agggagcagaagtatagagagagcaagtcggcggattgttctcccctgccttcgttggtg
gtttgtcctcctactttgacaggacactgggtttacgaggtggagaaattcgtcagccac
aaacacctcaggccgctccagtacaacggaaaccccgtcgagcgcgaaaaattgcgcggc
aaattcaaaaaatacaacctcattgtcgcttcatacgacatcgtgcgcaaagacaacaac
ttcttctccaacatcaaatggaactacgtcatcctggacgaagggcacatcatcaagaac
ggcaaaacaagaaccagcctggccatcaagcatttggtagcgaaccacagattgatactg
agcggcacgcccatacagaataacgtgttggagctgtggagcttgtttgattttctgatg
cccgggtttttggggacggagaaacagttcactgcgaaatattctcgccctatattggct
agcagggatccaaagtgttcaccgaaggatcaggaggcgggggttttggctatggaagct
ttgcatagacaagtactgccatttttgctcagaagaatgaaggaggacgttttggctgat
ctacctccgaaaatcactcaggattattattgcgaactgagtcctttacaggaacaactt
tatgaagacttttctaagtcacaagctcatcagacattacaggactctatatcttccgga
gccactgcgagctccatgcaaggcaacacccacatattccaagccctacgctacctccag
aacgtatgcaaccatccgaaactcgtcttaaaccccacccatccccagtaccaacacata
atcgcccagttgaaacagcacaattctaaactcgaagacatcgcacattcggccaaactg
ccggcactaaaacaattgctgaacgattgcgatatcggtaccaacttagacaacggtatt
tacaaggaatcggagatcgtgatcaatcagcacagggctttggtgttctgtcagttgaag
gcgatgctggacattatagagaacgatctgttcaagaagcacatgcccaacgtgacgtat
ttgaggctggacgggtcggtgccgcctgttatgagacattcggttgttacacgtttcaat
aatgacccatcgatagatgttcttcttttgaccactcaagttggaggcctaggtctcaac
ctaactggtgcagatactgtcatttttgtggagcacgactggaaccccatgaaggatctt
caggcgatggacagagcgcacaggattgaatcagaaagaagttgtggagatgtgtatcga
ctcataacgcggtctaccttggaagaaaaaataataggggtaaggaaatatacaccttgt
tatttagaacactctgtatatttaaacaaattttcagattacaaaagttcaaaggcacaa
acggcagcgaacacggtgatcagcngagagtttcaatacatggagacgatgggcacggaa
cagctcctcgatctgttctcgaacaaaccagtaattagtaggggcgacagcggttcttga
ggcaagggcaacggcatcaaagccattctggaatcgctgccggaactgtgggatctgagg
cagtacgacgacgaaacctgatttgaccagttcatgaccaaacttcaataa
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integrated database retrieval system
