Sitophilus oryzae (rice weevil): 115878344
Help
Entry
115878344 CDS
T07985
Name
(RefSeq) Bloom syndrome protein homolog isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03440
Homologous recombination
soy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115878344
03460 Fanconi anemia pathway
115878344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soy03032
]
115878344
03400 DNA repair and recombination proteins [BR:
soy03400
]
115878344
Enzymes [BR:
soy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115878344
DNA replication proteins [BR:
soy03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115878344
DNA repair and recombination proteins [BR:
soy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
115878344
Bloom's syndrome complex (BTR)
115878344
FA (Fanconi anemia) pathway
115878344
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ZSWIM_N
Helicase_C
RQC
RecQ_Zn_bind
HRDC
Helicase_Sgs1
SecA_DEAD
Trp_halogenase
Glyco_hydro_cc
SWIM
Motif
Other DBs
NCBI-GeneID:
115878344
NCBI-ProteinID:
XP_030750667
UniProt:
A0A6J2XHB5
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MAHDALPPRRPPVGALPSCCAPLRLRAPAPRNPDSLLDITAKKVAETVPFARIEERYNRI
PEPVQRRIVFWSFPRNERDICMYSSLSRVQSNQEPGSLAFCKGMKLLETGCVDNVLQVGF
HLSGVVTAHRNSPPASLPCGAPEPPHKFKVSVSFDRCKITSVTCTCDTRDIFWCQHVVAL
SLYRIRNAESVRLRVPISAGKLAVNSKILGSKKLAKTVTRNNSISKYFNKETTTASVKTS
KQDFFKDKISKSISLNKSESYSKQNQSSPSLKSLATGIKTPNKSMISNEVPTKEGPKKFT
FKKRSEAERCVLFDNLVNNSTLKTDFFIPKFESKQKVLPKETKVIATDLNQDNKFESKTE
TTSIIEEKHEKCVEKGESQITEIISISQSLEITEADYMNDAEFEKKFGNIADQMYNASSS
IIQEPSLLKKTTKSSIPDHDTEQLLNEMSTINWEDEEFNNEVKTTGFKDRTDDSAEFRTH
YEHSDVMLEVLHQKFGLRSFRPQQKEVINASVTQHDCFVLMPTGGGKSLCYQLPAVLVPG
VTVVISPLRALISDQVDKLNALDIPAAHLCSDLSRNQVDQIRLQLSLKEPPIKLLYLTPE
KIKASHIISDLLSSLHKRGKLARFVIDEAHCLSQWGHDFRPDYKELGSLRMTYRDVPIIC
LTATATKQVENDVINILRLCNVKKFIMSFNRPNIKYQVIHKKAKANKEIAELIKTKFSKQ
SGIVYCLARKHCDQLAEEFNKLGIKSKPYHAGMGDAVREAIQREWMQDRFYVIVATIAFG
MGIDKPDVRFVIHNSIPKSVEAFYQESGRAGRDGEVSYSYLFYNYSDVVQLQKLFALEKK
SRSNIDAHNENLRQMVSFAENAVDCRRHLLLIHLGEHFDRRICRSNKATTCDNCENEGSS
TTMEVSKEARELCTIIKDLASKENVTMCQAVAVYRGSRLKKLLERGHDRHPLYGAGARIL
INDANRILKHLILKQVLADFCVFTGEFPLVYIKPGQAFYRFLNSEQKLTISVSEERKSKP
TPEPVVESRPRSTEPVSRPQTPASTSKAKKKPVAKLQAARKLELAQLKVRCHEDLLEECR
RLAMERNLTLSSIMNLSAIKSMSDVLPQTRDEMLKIQHVTTANFDKYGQYFLKITADYRK
KYDDMLPLTQVAEEQPMKCRPDEDDLFESFADLSSSSSSKPRRGGYKRKGTWKGNKGGFK
RRKRNAGKSPRKSGAKSSWKGKKSSSSGLGLMPLHIK
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgacgcgctgccgccccggcgccccccggtgggcgctctgccctcctgttgt
gcccccttgcgtttacgggcccccgctcctcgaaatcctgattctttgctagacattacg
gcgaaaaaagtggccgaaaccgttccttttgcacggatcgaagaacgatacaatcgaatt
cccgaaccggttcaaagaagaatagttttttggagcttcccgaggaacgaacgcgatatt
tgcatgtattccagcctgagcagggtacagagcaaccaagaaccgggtagtttggccttc
tgcaagggcatgaaactgctggagacgggatgcgtagacaatgtccttcaagtcgggttc
cacctgagcggcgtggtgacggcgcacaggaattcaccccccgcctccctgccttgcggg
gctcctgagccgccccacaaattcaaggtgtccgtcagttttgacaggtgcaagatcacg
tcagtaacatgcacttgcgacactcgagacatcttctggtgtcaacatgtggtagccctg
tccctttacaggatccgcaatgcggaaagtgtccgtttgagagttcctatatccgcaggt
aaattggcagtgaattcgaaaatcctaggttcaaagaaactagctaaaacagttacaaga
aataacagcattagtaagtactttaataaagaaactacaactgcgagtgttaagaccagc
aaacaagactttttcaaagataaaatatctaaaagtatttctttaaataagagtgaatca
tattctaaacaaaatcaaagttcacctagtctaaaatctttagctacaggaataaaaaca
ccaaataagtctatgatctcaaatgaagtgcctacaaaggaaggaccaaaaaagtttacc
tttaaaaagagatctgaagcagaaagatgtgttttatttgataatcttgttaataattca
acattgaaaactgatttttttatacctaaatttgagagtaaacaaaaagtattgccaaag
gaaacaaaagttattgctacagatttaaatcaagataataaatttgaatcaaaaacagaa
acaacttctataatagaagaaaaacatgagaagtgtgtagaaaaaggtgaatctcagatt
acagagattatttctattagccagtcattggaaataactgaggctgattatatgaatgat
gcagaatttgaaaagaagtttggaaatatagcagatcagatgtacaatgccagttcaagt
attatacaagaaccatcactgcttaagaagacaacaaagtcatcaattcctgatcacgac
actgagcagttgctcaatgaaatgtcaacaattaactgggaagatgaagaatttaataat
gaggttaagacaacaggtttcaaagatagaactgatgattctgctgaattcagaacgcat
tatgaacattcagatgttatgcttgaggtgcttcatcaaaagtttggacttcggtcattc
agacctcagcaaaaagaagttattaatgccagtgttacacaacatgactgttttgtctta
atgcctacaggcggtggaaaaagtctatgttatcaactaccagctgttttagttcctggt
gtaacagttgttatatccccacttagggctttgatcagtgatcaagttgacaaacttaat
gctttggatatacctgctgctcatctttgttcagatctttcgcgaaaccaggttgatcaa
attcgattgcagcttagtttaaaagaacctccaataaaacttttgtatttaacaccagaa
aaaatcaaagcttcccatattatttctgatctcttgagctcacttcacaagagaggaaaa
ttggcaagatttgttattgatgaggcacactgtctttcacaatggggccacgattttagg
cctgactacaaggagttgggctctcttaggatgacttatagagatgtgcctattatctgt
ttgacagctacagcaactaagcaagtggagaatgatgttatcaatattctacgtttatgc
aacgttaagaagtttataatgagttttaatagacctaatattaaatatcaagtgattcat
aagaaagccaaggccaataaggaaatagctgaattgataaaaacaaaattttcgaaacaa
tcgggaattgtctactgtttagctagaaaacactgcgaccaattggcggaagaatttaac
aaattgggaatcaaatccaaaccttatcatgctggcatgggtgatgctgtcagagaggct
attcaaagagaatggatgcaagacagattctatgttatagtagctacaatagcttttggg
atgggtatagataaacctgatgttcgttttgttatacacaactccattcctaagtctgtg
gaggcattttatcaagaatctggaagagcaggacgtgatggagaagtgtcatattcctat
ttgttctataattacagcgatgttgttcagttacagaagttattcgctctagagaagaaa
tctagatccaacatagatgcccacaacgaaaatttaagacaaatggtgagctttgctgaa
aacgcagtggactgtcgaagacatctcttactcattcaccttggtgaacactttgatcga
agaatatgccgctctaacaaggcaacaacttgcgacaattgcgaaaacgaaggcagcagc
acaacaatggaagtaagcaaagaagcgagggaactctgcaccataataaaagacttagcg
tctaaagaaaatgtcactatgtgtcaagctgtcgcagtttacagaggaagcagattgaag
aaactcttggaaagaggtcacgacagacatccgttgtacggcgcaggagcgaggatttta
attaacgacgctaatcgtattttaaaacatctcatcttaaagcaagtcttagcagacttt
tgtgtcttcaccggcgagtttccactagtttacatcaaaccaggacaggcgttttatcgg
ttcctaaattccgagcagaaactaacaatttccgtcagtgaagaaagaaaatcgaaacct
acaccagaaccagtggtagaatcacgtccaagaagtacggaaccagttagtcgaccacaa
actccggctagtacttccaaagccaaaaagaagcctgtagctaagctacaggcagccagg
aagctagaattggctcagcttaaggtacgatgccatgaagacctcttggaagaatgtcgt
cgtttagccatggaaagaaaccttactctgtcatccataatgaatctttccgctataaaa
agcatgagcgacgtccttccccaaactcgcgacgaaatgctgaaaatccagcacgtcacg
acggcaaattttgacaagtacggtcagtacttcctgaaaatcaccgcagattatcgaaaa
aagtacgatgacatgttacccttgactcaggtggccgaagaacaaccgatgaaatgcaga
cccgatgaagacgatctttttgaatctttcgcagacttatcttcgtcgtcttcaagtaaa
ccacgtagaggagggtacaaaaggaagggtacatggaagggtaataaaggcgggttcaaa
agacgaaagagaaatgctgggaagtctccgagaaaatcaggcgcgaagagttcgtggaag
ggcaaaaaaagtagtagttctggactaggtttaatgccattgcacattaaataa
DBGET
integrated database retrieval system
