Sitophilus oryzae (rice weevil): 115878456
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Entry
115878456 CDS
T07985
Name
(RefSeq) protocadherin Fat 4-like isoform X1
KO
K06813
cadherin 23
Organism
soy
Sitophilus oryzae (rice weevil)
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
soy03037
]
115878456
04515 Cell adhesion molecules [BR:
soy04515
]
115878456
Cilium and associated proteins [BR:
soy03037
]
Primary cilia and associated proteins
USH complex and associated proteins
115878456
Cell adhesion molecules [BR:
soy04515
]
Cadherins
Major cadherins
115878456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
115878456
NCBI-ProteinID:
XP_030750831
UniProt:
A0A6J2XI99
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MGFPWFVLILPIVLQLQAVSAQSYDISAGSRVINCTYITGDNQRYLIYMWENNQNVSENS
KYQLFIINDATASPSVSFLDTNAKFQYNLEAVDSKYEFYSTQTFDYENNQKLFMLLIGTD
IVEINVLNYDDEQPTLTSPMCSLKELFDYDIHNTTCNATLTDTDGWVGQTTFKIINSRDD
TTNELEQEDKLFNFYIDTSLDSPENYTTTVYITTLRQLDYDTKIFYSFSVQAKDGAGHST
LPNENVTCIINVEDVNNKPPEFTDYFTAKQIVEKTEYDNFSIKAVDGDKGRNRDILYFVE
PVDSKEEEDPYISINKATGQLLIKPIDRDADDLITYQFRVRAQKVDDPPYNNSITVTLYL
EDLDDNSPLVMSLVNNTKNIVDYTNKDDKSYHIWIYENFADTLDATITITDIDTGNNALF
DVALEEYPTSAAAYTDAFFIVPTAGYRTAEFQISVKNATYLDYENSTWDNFQFYVHSSGR
YNLSLEDRLLVEISLIDYNDETPKFDKTSYEISVNETIKKGEQIIQVKATDRDAEDKILK
HVFVGAESITSKMDIDSAEGIITVAVDDAFDYDKINPVIFQVQAIDKADPPHTATVPVTV
KLLDVNNKAPTYTSDIMIEVNEKRIIGTKLNTSITASDIDTTNNLTAVIDWDNSYVTKNS
IKKDGSDPDIYNAMRFLNLTYHHKEDSTINGTIEIELYVNDVNENQTAPLYKTFDTLYLN
ITITDWNTLLPDFVDKMNTTALIAISIIDIRDNPPAFTEETLALNRTIQEEQKPGVLVGY
IEAKDPDEGDVVTYSCVVLNETYNWFDTSTTGSITVKTGATIDCDSYNISYVDINCTATD
GTHYVYQNFSIYILDKNNKYPAIDVNKTYASEVSVLEKSEGGTNVTEIDYHDADRDIPYH
TATCDLDDYGTNCYAAFEVTDNTVRVKQGAQLNRDEGIKMYECSLTCKDNPKNFEDEGRL
SNTTTFSIKLEDINDHAPVLITTDISAYENLKADALVGKVQGMDIDEGDNAEIDFNILSI
TKDGEEVSTPPFDIVKDDEDYYVPDNDTLKQWHLMTLIDLKDLYGTYAVHLNLSDKGTPQ
NYTDNAILTVVINKYNYYQPEFVYPSGDDPVYLSLDQEDKKQLILYSDNKYLDDFQITNV
DKTCSEKWDPTFDVQQISPSSSSFFYVLKTDRCVAQLQVQNYDRSKAKSETSFMLNVITT
LANVSELQPDEKSYTSSVSLSVIFVDLDQEPIFENIDQPCILYFLQDRLDTENTTAPLDR
KAKYPKIDVSPSIYYFISTSDVTITDTFDVDIDTGSVKLKQKLYYNTQNNYTFKILASKN
KTTISTNEQSYLTVEVKVVDSNIHVPQWTQSNFVGPIMRSTQQGSTVVTVEATDEDKIDQ
GKLKYTINSTIEAVGSDSIKRPTVPFYLGESTGDVSLNFTVDYNMYGYFVFTIKVEDPAD
DFGNPSHENTTKVTIYIVTDDNTANFRFENTLEDVTANLVKILASISTWLNWDCHDQNVR
HDTNNGQELTNVTVAAIYCVEDDTLQTSTDILKKVGNINTFQNLRKELLTFGILLQSFTS
ESTTSDNLEQILKLALIIVTVILGTLCVILAITFFLKIRGLNRRLKKLTEPKFGSDESNL
NRKAINAPTTNLFAVEGSNPVFNNEVIKEDLMYDKHSIHSGDSDLIGVEDDPEFDMFGER
QDRF
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgggattcccatggtttgtcctcattttgcccatagttttacaacttcaagcggtttca
gctcaatcgtacgatattagtgcaggatcaagagttattaattgtacatatataacaggc
gataatcaacgatatcttatttatatgtgggaaaataaccaaaatgtttcagaaaacagc
aagtatcaactttttattattaatgatgcaacagctagtccaagtgtatcattcctggat
actaacgccaaatttcagtataatttagaggcggtagactccaagtacgaattttattca
acgcagacatttgactatgaaaataatcagaaattatttatgttgctgattggtaccgat
attgttgagattaacgttctgaattacgacgatgaacaaccaacgctaacttccccaatg
tgttcattaaaggaacttttcgattatgatatacataatacaacttgcaatgccacactg
acagatacggacggttgggttggacaaaccacatttaagataatcaacagtagagatgac
acgacaaatgaactggaacaggaagataagttgttcaatttctacatcgatacaagttta
gattcgccagagaattatactaccaccgtttatatcaccacactaaggcaactggattat
gacacgaaaattttctactcgtttagtgtccaggctaaagatggtgcaggtcattcgaca
ttaccaaatgaaaacgtcacctgtatcattaatgttgaagatgtgaacaataaaccacca
gaattcacagattatttcacagcgaaacagattgtggaaaagaccgaatacgataacttt
agtataaaagctgttgatggtgacaagggtcgaaatcgtgacatactttactttgtcgaa
ccagtagattctaaagaagaagaagatccttatatcagtattaacaaagccactggtcaa
ttacttattaaacccatcgatcgagatgcagatgacctcatcacctatcagttccgcgta
cgagctcaaaaagtagacgatcccccatacaacaattcgataacagtcacgctttactta
gaagacttggacgataacagccctttggtcatgtcgctggtcaataacaccaaaaacatc
gtcgactacaccaataaagatgataaatcgtaccatatctggatctacgaaaattttgct
gatacacttgatgctactataacgataaccgatattgatacgggaaataatgctttattc
gatgttgccttagaagaatatccgacttctgcagcagcttacactgacgcgtttttcatt
gtgcccacggccgggtacagaacagcagagtttcaaatcagcgtcaaaaacgccacatat
ttagactacgagaatagtacttgggacaactttcagttttatgtacattcctctggaaga
tataacctgtcattagaagatcgtcttttagtggaaatcagcctcattgattacaatgac
gaaacgccgaaatttgataaaaccagttatgaaatttcggtaaacgaaaccatcaaaaag
ggagaacaaattatacaagttaaagccaccgatagggacgcagaagataaaatactcaaa
catgtgtttgtcggggccgaatcaataaccagcaaaatggacatagactcagccgaaggg
ataataactgtggcagttgatgatgctttcgattatgacaagataaatcctgtcattttt
caagtacaagcaatcgataaggccgaccctccccataccgctacagtccccgtaactgtc
aaactacttgatgtgaacaacaaagcgccaacatatacatcagacataatgatagaagtt
aatgagaagagaattatcgggaccaaactaaatacatcaataacagcgtctgatatagac
acgactaataatcttactgctgttatagactgggataactcatacgtgacaaaaaactcc
atcaagaaagatggtagtgatccagatatttataatgctatgcggtttttaaatttgacg
tatcaccataaagaagatagcacgatcaacggcactattgaaattgagttgtacgttaat
gatgttaacgaaaaccagactgccccgttatacaaaacgttcgacactctctatttgaat
attactataactgattggaataccctgcttcccgacttcgtagacaaaatgaacactaca
gctcttattgccataagtattatcgatatacgggataatcctccagcattcaccgaagaa
acactggcactaaacagaacaattcaagaagagcaaaaaccaggagttttagttggttat
atcgaagccaaagaccctgatgaaggtgacgttgtcacctattcatgcgtagtactgaat
gagacatacaattggtttgatacatccacaactggaagtattaccgttaaaactggagct
actattgactgtgactcatataatatttcttacgtagatatcaactgtactgctactgat
ggaacgcattatgtgtatcaaaatttctcaatatatatcttggacaagaataataaatac
ccagccatcgatgtgaataaaacttacgcttccgaagtatctgtattggaaaagagcgaa
ggtggaactaacgtaaccgaaatcgattatcatgatgcagacagagatattccataccat
accgctacttgtgatctggacgactacggtaccaactgttacgctgctttcgaagtaaca
gataacactgtacgtgtcaagcaaggagctcagcttaacagagatgaaggcattaaaatg
tacgagtgtagtttaacatgcaaagataatcccaaaaattttgaagatgaaggtcggctc
tcgaatactactaccttttcaataaaattagaggatataaatgatcatgctcctgtgtta
ataactaccgatatttcagcttatgagaatctaaaagcggacgcgctggttggcaaagta
caaggcatggatattgacgaaggtgacaatgccgaaattgattttaacattcttagtatt
actaaggacggtgaggaagtgtcaaccccgccttttgatatagtaaaagatgatgaagac
tattacgttccggataatgataccctcaaacaatggcatttgatgactttaattgattta
aaggacttatatggtacatacgctgtgcacctaaatctatcggataaaggaacgccgcaa
aactatacagacaatgccatactcacagtagtaatcaataaatataattattaccaacca
gaatttgtttatcccagtggagatgacccagtatatctcagtttagaccaagaagacaaa
aaacagcttatactatactccgataataagtatttagacgatttccaaataacgaatgtc
gacaaaacttgttcagaaaaatgggatcccacgtttgatgttcagcaaatatcaccaagt
tcctcgtcatttttctatgttctcaaaacagatcgttgtgtcgctcagcttcaagttcaa
aattatgaccgatcaaaagcaaaatcagaaaccagctttatgcttaatgtaataaccaca
ctagcaaacgtaagcgaattgcaaccagacgagaaatcctacacatcgtcagtcagtttg
tcagtaatattcgtggaccttgatcaagaacctatttttgaaaacatcgatcagccctgt
atcttgtacttcctgcaggacagattggatactgaaaacactaccgctccgctggacaga
aaagcgaaatatccaaagatcgatgtgtcgccttcaatatattacttcatatcgacaagt
gacgtcactatcacagatacatttgatgtggacatcgatacaggttctgtaaaattgaaa
cagaaactttattacaacacccaaaataattacaccttcaaaatactggcttcaaaaaat
aaaactacaatatctacaaacgaacaatcctacttgacagtagaagttaaagttgtagat
tcaaatattcatgttccccagtggactcagagcaacttcgttggaccaataatgaggagt
acacaacaaggaagcacagttgttactgttgaggcaacggacgaagacaaaatcgatcaa
ggaaaattaaagtacaccataaacagtacgattgaggcggtcggatcagatagtattaaa
agacctacagtacctttctatctgggagagagcacaggcgatgtatctttgaacttcaca
gtcgattacaacatgtacggatatttcgtattcacaattaaagtcgaagacccggcagat
gattttggcaacccatcgcatgaaaacacaaccaaggtaacaatatacatcgtaactgac
gacaatacggcaaacttcagatttgaaaacactttagaagatgtaactgctaacctagta
aaaatcctagcatcaattagcacctggttaaattgggactgtcacgatcaaaacgtacgg
cacgatactaacaatggtcaggaattgaccaatgttacagttgctgctatttattgtgta
gaagatgacacattgcaaacatccactgacattttaaagaaagtaggaaatattaacact
ttccaaaatttgcggaaagagttattgacatttggtattctgctacaatccttcacgtca
gagtcaaccacttccgacaatctggaacaaatactaaaattggctttgatcatagtcaca
gttatactgggaacgctgtgcgtaattttagcgataactttcttcttaaaaataagaggg
ttgaacaggagattaaagaaattgacagaacccaagttcggttcagatgaatcgaatttg
aacaggaaggcgattaacgctccaaccacaaacttatttgctgttgagggctcaaaccca
gtgttcaacaatgaagtcattaaagaagacttaatgtatgataaacatagtatacacagt
ggtgattccgacttgataggcgttgaagacgaccctgaattcgatatgttcggcgaacga
caagatcgtttttaa
DBGET
integrated database retrieval system
