Sitophilus oryzae (rice weevil): 115879144
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Entry
115879144 CDS
T07985
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115879144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soy03041
]
115879144
Spliceosome [BR:
soy03041
]
Complex C
Other components
Step II factors
115879144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
PQQ_2
TrfA
Motif
Other DBs
NCBI-GeneID:
115879144
NCBI-ProteinID:
XP_030751675
UniProt:
A0A6J2XLA7
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MLSLQAYNSSSDEESDQTAVQEKSNGTPYETLPPELQKFSSKKDLQVCATPVVLPPAIDE
DKIHIHPDTSELQYNPKYDELFAPVVGPVNPFKTQQQAIERNILSGHIEPAHVSEFQFEN
QRRTFASFGYALDPSVSTTEKELHKVIGGSEETPDSDMKTVFENTKLRPLDKRKRKKNDD
PSDVEGFLGPWGGFVGEQRVMKPTEEEQAELQELVSKRNRRGKEVEEKQFEEKSVLHIKD
AVDYQGRSFLHAPQDVGVNLKSDTPPEKCFLPKAHIHTWSGHTKGVSAIRWFPKTAHLFL
SCSMDSKIKLWEVYNERRCIRTYYGHRQAVRDINFNNSGHHFLSAGYDRYIKLWDTETGR
VISRFTSRKIPYCVKFNPDHNKQHLFVAGTSDKKIICWDTRSGDIVQEYDRHLGAVNTIT
FVDENRRFVTTSDDKSLRVWEWNIPVDMKYIADPTMHSMPAVTPSPNGKWLACQSMDNKI
VIFSALNRFKLNRKKTFTGHMVAGYACQLDFSPDLSYLVSGDADGKCFIWDWKTTKLYKK
WKAHDGVCIGSLWHPHEPSKVMTAGWDGLIKYWD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgttatcactgcaagcttataatagtagtagtgatgaagaatctgatcaaacagcagtt
caagaaaaatcaaatggaacgccttacgaaactctaccgccggaactccaaaagttttca
tctaaaaaagatcttcaggtttgtgcaacccccgtagtcttaccccccgctatagatgaa
gataaaattcatattcaccctgatacatcagagctccagtataacccaaaatatgatgaa
ctatttgcaccagtcgtagggccagtaaatccttttaagacgcaacaacaagcaatcgaa
agaaatatactatcagggcatattgagcctgcacatgtcagtgaatttcagtttgagaat
caaaggcgaacgtttgctagtttcggttatgcattggatccttcagtaagtactaccgaa
aaggaattacataaagtaattggaggatcagaagaaacacctgattcagatatgaaaacc
gtttttgaaaatactaaattgagaccattagataaaagaaaaagaaagaaaaatgatgat
ccaagtgatgtagaaggatttttaggtccatggggtggatttgttggagaacaaagagta
atgaaaccaacagaagaagagcaagccgagcttcaagaactggtttctaaaagaaatagg
cgagggaaagaagtggaagaaaaacaatttgaagaaaaatctgttctgcatattaaagat
gcagttgattatcaaggaagatcattcttgcacgctccccaagatgttggtgttaatctt
aagtcagacactccaccagaaaaatgtttcttgccaaaagctcacattcatacctggtct
ggacatacaaaaggtgtatctgcaattcgatggtttccaaaaacagcacatctattttta
tcttgtagtatggattccaaaatcaaactctgggaagtttacaacgaaaggcgatgtatc
aggacttattatggccacagacaagcagttagagatattaacttcaataatagtggacat
catttcctatcagctggttacgatagatatatcaagttatgggacactgaaactggacgt
gttatatcgcgatttactagtagaaaaataccttactgcgtaaaattcaatcccgatcat
aataagcagcatctgtttgtagctggtacgtctgacaagaaaattatttgttgggataca
agatcaggcgatattgttcaagaatatgataggcatttgggcgctgtaaataccataact
tttgttgacgaaaacagacgttttgttactacttccgatgacaaatcattaagagtgtgg
gaatggaatataccagttgatatgaaatatattgctgatccgactatgcacagtatgcca
gctgtaactccaagtccaaatggtaaatggttagcatgtcagagtatggacaataaaatt
gtgattttttctgcattaaatagatttaaactaaacaggaaaaaaacatttacaggtcat
atggtagcaggatatgcctgccaattagatttctcacctgatctttcgtatttggtctca
ggagatgctgacggaaaatgttttatatgggactggaaaaccaccaaattgtacaaaaaa
tggaaggcacatgatggtgtgtgtattggttctctttggcatccccacgaaccaagtaaa
gtgatgacagctggttgggatggtttaattaagtattgggattaa
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integrated database retrieval system