Sitophilus oryzae (rice weevil): 115879352
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Entry
115879352 CDS
T07985
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03013
Nucleocytoplasmic transport
soy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115879352
09122 Translation
03013 Nucleocytoplasmic transport
115879352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115879352
03041 Spliceosome [BR:
soy03041
]
115879352
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115879352
Spliceosome [BR:
soy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115879352
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
IFNGR1_transm
DUF5559
Motif
Other DBs
NCBI-GeneID:
115879352
NCBI-ProteinID:
XP_030751988
UniProt:
A0A6J2XKF4
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MVKENSNAVKKKRKANTTEADAETDIYKKACDFEENESQNRNSSEDAELFFQICQEIHDF
LDQVRELKQSSGDTSQKLSCLTDIVVKICVIKKLNRLDKLAHVLGREALNTEKQKCDSIK
LTYQNLVYELHHLVTETNKCLSFKSEDEDIELVSFEDFMKNAPEAVSKKFIDFDPNDSEQ
DHALRLARLEWELTQRKNLAEECKALEEKKKKVVEEITERKERLNDLLPLLTTVIKATKP
LQEHLGMSSELTRKEHKLAPLLSDPLYVLYANIVAYKSVFETNINVSILGDKDDATQFNE
AQEVSHSNNLNEEDSEPESDLPEVEEVVEVKKRRHRKSVQQVDPVEEKKKKLLEVHPLTV
QLSLSITDGPSLVIIFSYYTKLKTITVKSQVDMPSNFTSDTAREILSGHNILSELLDNDT
GMESPNPSTAYQLKKLGLGSFQTLVPDIGYAYGWAQSICGIDFLTPKRYCDKLSQQSVET
ILKITKKRLNTRTHLAKQMQQLEKNILSEIPEELQIPTTAISSLNKWSSTTYQDFCLAEY
TQHLLDENLVSQSDLFYSAKISRDEATLNLYIVIRNTYPIPAPIVALCLDYKGKYTSTNC
DEIRDLERTINIDWNYGIRSSSWLLSAQITHLCSYLDVYLETLDSNVFQPNAKFIRSVSG
RNKKRPFKFRKIGTGLFTQY
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagaaaatagtaatgctgtaaaaaagaagcgaaaagcaaatactactgaagcg
gatgccgaaaccgacatttacaagaaagcgtgcgattttgaagaaaatgaatctcaaaac
cgtaacagttctgaagatgctgagttgttctttcagatttgtcaagaaattcatgatttc
ttagatcaagtacgggaattaaaacagtcatctggagatacatctcaaaagttatcatgt
ttaacagatattgtagttaagatttgtgttattaagaaacttaatagacttgacaaactt
gcccatgtattaggtagagaagcccttaatacggagaaacaaaaatgtgacagtattaag
ttaacatatcagaatttagtttatgaattacatcatttagttacagagacaaataaatgt
ctgtctttcaagtctgaagatgaagacatagagttagtatcctttgaagactttatgaaa
aatgctcctgaagcagtgtctaaaaaattcatagattttgaccctaacgatagtgagcag
gatcatgctttgcgattagctagacttgaatgggaattgacacagcgtaaaaatcttgca
gaagaatgtaaagctttggaggaaaaaaagaaaaaagtagttgaagaaatcactgaaaga
aaggaaagactaaatgatcttttaccattattgactacagttattaaagctactaaacct
ttacaagaacatttgggaatgtctagtgaactaactaggaaggagcataagttagcacct
ctcttgtcagatccattgtatgtactttatgctaatatagtagcatataaaagtgttttt
gaaacaaacataaatgtaagtattttgggtgacaaagatgatgccacacagtttaacgaa
gctcaagaagtgtctcattcaaataacttaaatgaggaagattctgagccagaatctgac
ttgccagaagttgaagaggtggttgaagtgaaaaagagaagacatagaaaatcagttcag
caggttgatccagttgaagagaagaaaaagaagttgcttgaggttcatcctttaactgtt
caactttcactatctataacagatggcccatctttagttattattttcagttattatact
aaactaaaaactataacggtcaaatcacaagttgatatgccttcaaattttacttcagac
acagctagagaaattttatctggtcataacattttaagtgaacttttggataatgataca
ggaatggaaagtcctaatccaagtacagcatatcaattaaaaaaacttggattggggtca
tttcaaacacttgttcctgatattggttatgcttatggatgggcccaatctatttgcggt
atagattttttaacaccaaagagatactgtgataaattgagccaacaaagtgttgaaaca
atattaaaaatcacaaagaaaagattgaacactagaacacaccttgcaaaacaaatgcaa
cagctggaaaaaaacattttatctgaaatcccagaagaactacagataccaaccactgct
atatcatccttaaataaatggtcttcaaccacttatcaagatttttgtcttgcagaatac
acacaacatttgctagatgaaaatctggtgtctcagtctgacctattctattctgcaaaa
atatccagggatgaagcaactttgaacctttatattgtaataagaaatacttatcccatt
cctgccccaatagttgccttatgtctggattataaaggcaaatatacgtcaacgaattgt
gacgagattcgggatctagaaagaactataaatatagactggaattatggaattcgcagt
tcatcatggttactctcagcccaaataacacacctttgttcatatctggacgtgtatctg
gaaactcttgattcaaacgtttttcaacccaatgctaaatttatcagaagcgttagtgga
cgaaataaaaagaggccatttaaatttaggaaaattggaacaggactcttcactcaatat
taa
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