Sitophilus oryzae (rice weevil): 115879701
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Entry
115879701 CDS
T07985
Name
(RefSeq) SR-related and CTD-associated factor 4-like isoform X1
KO
K13191
RNA-binding protein 16
Organism
soy
Sitophilus oryzae (rice weevil)
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soy03021
]
115879701
03041 Spliceosome [BR:
soy03041
]
115879701
Transcription machinery [BR:
soy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115879701
Spliceosome [BR:
soy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115879701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
115879701
NCBI-ProteinID:
XP_030752515
UniProt:
A0A6J2XNR8
LinkDB
All DBs
Position
Unknown
AA seq
1442 aa
AA seq
DB search
MEAVKAFNAELSALYEVKPPISKAKMTAITRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGTEKDVFAPRFAKNLQQTFVNLFKCPPEDKSKIIRVLNLWQKN
QVFQAEVIQPLFDFADPNNPIHQQIQQQQTPVLQTNGGSAAAQQAAIKGSPALQRTPTKA
NQTTDGGASNLNLQNLSEPVLQQLQQLQRLLIKGADAGRPEQVHFDKKLLDFDYGDDEEE
VNPSPRPPQMQPVEPIANLLTNPEVLRQLQNLQNTIANAVPMSQAELDQEKLKKLQEMKM
QEDEFDKHLAQTVPNLPFAAECEFKPNNQPTMIGGFQFIPPPTDSSQMSQSYDMSMSHDN
SGGFGGSQNSTGNDVEIITLDHDDSHSPSEDRYNKRRRSRSRSRDRGRDKDRDRRSRRSR
SRSKGRRHRSRSRDRDRRDKDRKEKEKESERDRERKKRGLPAIKPENLSVCSTTLWVGHL
SKLVHQDDLSNTFGEFGDIVSIDLIPPRGCAFIVMHRRQDAARCLNKLKNHNMQGKAITL
AWAPGKGVKGKDLKDYWEGDLGVSYIPWNKLKQDIDLEMLEDGGMIDEETMPTWMRQKIE
ELNKKKTITITPPDKPPYFGGNLNMGDMKVGTASMGSIDTSQPPPMPGTNLLQPQLLPLV
NPFQYNNRLLGLMPNMANMNLPIGVPPPNMPPPMMPNLGLGLNSPFQGPPSMMPPPHLPP
PTMENKPTPPPPNSDASLRSLSESLMNLAGQPLTMPPMTQPPPPHNIEDNMDIEMEDAVG
HHESKSAVSLTEQLEASMQQNFSNRREDNSNKRDNRRDDRGRRRSRSRDRDQNRDSRSGG
GRGRDRRDRDRDFRGRSRDRNERDRDRDGRDRRPQNDRERRWGPPDRRDDRRDDRRDDRR
DDRRDYFDRRGGDEDDRGGEKTLNDRLKEMAGMKFDEPPPNTRERKLSDATKRSQQQVKD
EGAAGKEEVKEEKKEVPKIEEKKEGESVAFTFEPPPAIADDDAGFRGPPIGDFGPPDRLG
NDNMDFNPHLDEPPPFDDRPYPPYGSEDAFDGRYDESERHYARNASPSYRSEGPFGPDGP
PFGPDGPPFGPDGPPFGPDGPPFGPDGPPFGPDGPPFGPDGPPFGPDGPPFGPDGPPFGP
DGPPFGPDGPPFGPDGPPYGPDGPYDEPFMDEYGMMEYGPDFGSGFDGPRFMRGRRGGQR
RGRGRDDFFPPRDEFGPPMVRGGPDFGPRGPRGRGFFGRGRGRGGVPFRDGPPNAFNPPF
DGPPDFFRGPRGGHRPPFDDAYNRGRGGRFRGRGGRQGPDFFEGGPPHFRDSPPPFGEGP
PGLDFPPRMEDFEQPPPRAERTRSRWGNEDDREQQNEISREDTNQEGGGDGGAAMEGPAD
NGSGTPLRDEAIDHHAEQQPTENDHEAQSQNFSAQQFEPEPFEADQGQGPEENAAEAVEN
QE
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtaaaagcatttaatgcggagctgtccgccttatacgaggttaagcctccc
atctccaaagcaaaaatgaccgctataacgaggggagctataaaagccattaagttctac
aaacacgtcgttcagagcgttgaaaagttcattcagaaatgcaaacccgagtataaagtc
ccaggcctgtatgtgatagattcaatcgtccggcaatccagacaccagttcggtacagaa
aaagatgtctttgcacctaggtttgccaaaaatctccaacagacatttgtgaacttgttt
aaatgtcctcccgaggataagagtaaaataattcgagtgctgaacctttggcagaagaac
caggtattccaagccgaagtgatacagcctttgttcgattttgctgatcccaacaaccca
attcatcagcaaattcaacaacagcaaacgcctgtcttgcagaccaatggaggatctgcg
gcggcgcaacaagcagcaattaaaggttcacccgcactgcaaagaactcctaccaaggcc
aatcagacgacggacggaggcgcttcgaacttgaatttacaaaatctgagcgagccagta
cttcaacaactccaacaattgcaacgtctactaataaaaggcgccgatgcgggtagacct
gaacaagtccacttcgacaagaagctcctcgatttcgattacggcgacgacgaagaggag
gtcaatcccagtcccagacctccccagatgcagccggtagaacccatagcgaacctccta
accaacccggaggtgctcaggcaactgcagaacttgcaaaacaccatcgcgaacgcggtg
cccatgagccaggctgaactcgatcaagagaagttgaagaagcttcaggagatgaagatg
caggaagatgagtttgataagcacctggctcagaccgttcctaatttgccttttgccgcg
gagtgcgagtttaaacccaacaatcagccgactatgatcggagggttccagtttatacct
cctccgaccgatagcagtcagatgtctcagagttacgacatgtctatgtcgcatgataat
agcggtggatttgggggtagtcagaatagcactggcaacgatgtagagataataaccttg
gatcatgacgattcccattctccgtccgaagatagatacaataagagaagaaggagccgt
tccagatctagagatagaggtagggacaaggaccgtgatagaagatccagacggtccaga
tcaagatccaaaggtagaagacacagatccaggtcgcgagatagggacaggagggataag
gacaggaaggaaaaggaaaaggagtctgaaagggacagggaaagaaagaaacgtggactt
cccgccattaaaccagaaaatttgagcgtttgcagtaccacactttgggtaggtcattta
tccaaactagtacaccaagacgatctgtcaaacacgttcggtgaattcggcgacatcgtc
agtatcgacttgatcccgccaagaggttgtgccttcatagtgatgcacaggagacaggac
gcagccaggtgcctgaacaagctcaagaatcacaatatgcaaggaaaagccatcactttg
gcttgggctccaggaaaaggtgtgaaaggcaaagatctaaaagactactgggagggtgat
ttgggagtgtcgtacattccttggaacaagttgaagcaggacatagacttggaaatgtta
gaagatggaggaatgattgatgaggaaacgatgccgacttggatgcgacagaaaatcgaa
gagttgaataaaaagaagaccatcaccatcacaccgccagataaaccaccatattttgga
gggaacttgaacatgggagatatgaaagtaggcacagcttcaatgggttcaattgatacc
agtcagccacctccgatgcccggcaccaatctgctgcaaccgcagcttctgcctttggta
aacccgttccaatacaacaacagactattgggtttgatgccgaacatggccaacatgaac
ctgccgatcggagtgccccctcccaatatgccgccacccatgatgccgaatttagggtta
ggcctgaactcgccattccaaggtccgccaagtatgatgccgcctccgcatttgcctcct
cctacaatggaaaataaacctactcctccaccacctaattctgatgctagtttgcgtagt
ctgagcgagtcgttgatgaatttggccggacagccactgactatgcctccgatgactcag
cctcctcctccacacaatatcgaggataatatggatattgaaatggaagatgcagtcgga
catcatgagtcaaaatctgcagtttctctaactgaacaattagaagcatcaatgcagcaa
aacttttctaacagaagagaggataattctaataaacgtgataatagaagagatgataga
ggtagaagaagaagcagaagtagagatagagatcaaaatagagacagtcgcagtggcggc
ggcagaggccgtgaccgtcgagaccgcgatcgcgacttcaggggccgcagccgcgatcgc
aacgagcgcgatcgcgacagagacggccgcgacaggcgtccccaaaacgacagagaacgt
cgctggggtcctcccgaccggcgcgatgaccggcgtgacgatcggcgcgacgaccgacgt
gacgatcgcagagactacttcgaccgacgtggcggcgacgaggacgacagaggcggcgag
aaaaccctgaacgaccggctcaaggagatggcgggcatgaagttcgacgagccgccgccg
aacactcgtgagaggaaactgtccgacgcgacgaagaggtcgcagcaacaggttaaagat
gaaggtgcggcggggaaagaggaggtgaaggaggaaaagaaggaggtgccgaagatcgaa
gagaagaaggagggggagagtgtggcgtttacttttgaaccgccgccggcgattgcagat
gatgacgcaggattcagaggcccacctataggcgatttcggtccacccgaccgattaggc
aacgacaacatggactttaatccgcatctggacgaacccccgccctttgacgaccgtccc
tatcccccgtacggttcagaagacgccttcgacggccgctatgacgaatcagaaaggcac
tacgctcgcaacgccagtccatcctaccgttcagaaggcccgttcggtcccgatggtcct
ccgttcggtcctgatggtcctccgttcggtcctgatggtcctccgttcggtcctgatggt
cctccgttcggtcctgacgggccaccatttggaccagatggaccaccatttggaccagat
ggaccaccatttggaccagatggaccaccatttggaccagatggaccaccattcggacca
gatggaccaccatttggaccagatggaccaccgttcggccctgatgggcctccatacggt
cccgacggaccttacgacgaaccctttatggatgaatacggcatgatggaatacggtccg
gatttcggttccggcttcgacggaccgagatttatgaggggtagacgtggcggccagagg
cggggcagaggaagggacgacttcttcccgcccagagacgagttcgggccgccaatggtg
cgtggcggacccgattttggaccaagaggaccgaggggcagaggattctttggacgcggt
agaggacgcggcggcgttcctttccgtgacggcccacccaacgctttcaacccgccgttc
gacggccctcccgacttcttccgaggtccacgaggcggtcaccgaccgcccttcgacgac
gcctacaacagaggtcgcggcggtcgcttcagaggccgtggcggtcgccagggacccgac
ttcttcgagggcggaccgccgcatttcagggatagcccgccgcctttcggcgaaggccct
ccgggtctagatttcccgccgagaatggaggatttcgaacagccgccgcccagagcggaa
aggacgaggtccaggtggggtaacgaggacgacagagagcagcaaaacgagatttcacga
gaggacacgaatcaagagggtggaggtgatggaggggcggctatggaaggacctgcagat
aacggttctggcactcccctgagggacgaagccatagaccaccacgctgaacaacagcca
actgagaacgatcacgaagcacagagtcaaaattttagcgcacaacaatttgaaccggaa
ccttttgaagctgatcaaggacaaggaccagaagagaatgctgcagaagccgtcgaaaat
caagagtaa
DBGET
integrated database retrieval system
