Sitophilus oryzae (rice weevil): 115879733
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Entry
115879733 CDS
T07985
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115879733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soy03400
]
115879733
DNA repair and recombination proteins [BR:
soy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
115879733
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
ENTH
Motif
Other DBs
NCBI-GeneID:
115879733
NCBI-ProteinID:
XP_030752562
UniProt:
A0A6J2XMI5
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MSKRVSQTNTLFNYFSSPKGKLTPKKTGETSNTPSKTVNTPLENKENIKKEVRDEESDEE
IRCKKKRSRVALIDSESESENDTPVKRKSSAPHSRPSKKQKIASDESQSEDSDSEKSLNE
SKSEISSSSQQSLINSFGFKKKEENGEVRKSVDVKKPEKKKEKIVENNTDSSWPHEKLEF
LKPEKIRDAEKRKPSHPEYDPRTLYVPPDFLNQVTPGMRQWWMLKSQHMDCILFFKMGKF
YELYHMDAVIGVQVLGISYMKGETAHSGFPEKAYGKMATTLVDRGYKVARVEQTETPEMM
TERCKQQKKTTKFDKVVTRELCQISSRASCVYGPQMPEAKSNMGCYLYGIAAKVSSDGTS
RFGVTFVETSIGKFYMSEFDDDKFCSKLLTIFSEYPPGLILTEKTSNYGYFKSILSSIMK
DVMQETLAPKTQFYAASKTLETLYSHAYFKDKNGKFVWPHAFNDVAEECNPKQEYELALK
SLGGVHWFLKNSQLDIQVFSMNQFELYNPIVLKDAGQNEAIYKRDHMVVDSATIKHLHLL
GGAGSLERKLDFCKTAFGKRMLPLWICRPSCNINEIKCRQGAISEIFGNAQIFKATQDIL
SKLPDLERQVAKIHVYGNKVYSTNHPDSRAILYEGKFYSKTKIMDFIKTLRGFELSQQIV
SIYEDCESSLLRNLTQYEPKGIFPDLTDTLKFFKGAFNHEQAEKDGSIIPKSGVDSDYDR
VQLDIEEINKELQKYLKEQSKYFGCEVTYFGTDKKRYQLVIPENKARKADDSYYLEGQKK
GAKPVKRFTTDTTKELLQKMMKAEAERNKIIRDLNRRIFEKFSQKSEEWQQVIHCLTVLD
LLCSLAQYARKYSGDICKPDVQEFSKNPFISIANGKLPNAPYIDNFVPNDTSLGGQDAAP
LLILTGPNMGGKSTLMRQVSIICIMAQMGSFVPASKCSLSLIDRIFTRLGACDDIIRGQS
TFFVELSEASMILKHATKQSLLIVDELGRGTSTHDGNAIATAYVRKLVEMKCRTIFSTHY
HSLVDHFVDDKNVHLGHMACMVENDDDPSEESVILLYKLAEGRCPKSYGFNAAKLAGVKA
EVVARARTIAKEIEDEDLYRRTFTTIFSRKSDPEYVKQLLKNLKI
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagagtaagtcaaaccaatacactttttaactatttctcttctcccaaagga
aaattgactcccaaaaaaactggagaaacttctaacacaccaagtaaaacagttaacacc
cctttagaaaacaaagaaaacataaagaaagaagttagagatgaagaaagcgatgaggaa
atcagatgcaaaaagaaacgtagtcgcgttgctttaattgatagtgagtctgaatctgag
aatgacacaccagttaaaaggaagtcctcagcaccccatagtaggccatcgaagaaacaa
aaaattgcatctgatgaatctcaatctgaagactctgatagtgagaaatccttgaacgaa
tcaaaatctgaaatctcttcttcatctcagcaatccttaataaattcatttggatttaaa
aaaaaagaagaaaacggcgaagtgagaaaatctgttgatgtgaaaaagccggaaaaaaag
aaagaaaaaatagtggagaataatacagattccagttggccacacgaaaagttagaattc
ttaaaacctgaaaaaataagagatgcagaaaagaggaagccctcacatccagagtatgat
ccacgtacattatatgttccgcctgattttttaaatcaagtaaccccgggtatgcgacag
tggtggatgttaaaaagtcagcacatggattgtatcttgtttttcaaaatgggcaaattt
tatgaattgtatcacatggatgcagtgattggagtgcaagttcttggaatatcttacatg
aagggtgaaactgctcattctggttttcctgaaaaagcttatggaaagatggccactact
ttagttgataggggttacaaagtagctagagttgaacaaactgaaacaccagaaatgatg
acagaaagatgtaaacaacagaagaaaactacaaagtttgataaagttgtaactagagaa
ctatgtcaaatctcatctagagcgtcttgtgtgtatggacctcaaatgcctgaagcaaag
tcaaatatgggatgctacctgtatggaattgcagctaaagtatcaagtgatggaacgagt
agatttggagtcacctttgttgaaacttcaattggcaaattttatatgtctgaatttgat
gatgacaaattctgttcaaagttactaacaatattctcagaatatccacctggattaatt
ttaaccgagaaaacatcaaattatggctattttaaaagcattttatccagtattatgaag
gatgtaatgcaagaaactttagctccaaagacacagttttacgctgcttcaaaaacatta
gagaccttatattcgcacgcttatttcaaagacaaaaatggcaagtttgtatggccccac
gcttttaatgatgtcgcagaggaatgtaatccaaagcaagaatatgaattagcactgaag
tcgctgggaggtgttcattggttcttgaaaaattcacaattagacatacaggttttttcc
atgaatcagtttgaattatataatcctatcgttctaaaggatgctggtcaaaatgaggca
atatataaaagagatcacatggtcgtagactctgccacaatcaagcatttacatttgtta
ggtggtgctggaagtcttgagaggaaacttgatttttgcaaaacagcttttggtaaaagg
atgttgccattatggatctgcagaccatcctgcaacatcaacgaaataaaatgtaggcaa
ggagctatcagtgaaatttttggaaatgcccaaatatttaaagcaacacaagacatatta
agtaaactgcccgatctggaaagacaagttgccaaaattcatgtttacggaaacaaagtt
tattcgacaaatcatcctgatagcagagctattctctatgagggcaagttttattccaaa
accaagattatggactttatcaaaactttgagaggattcgagttgtctcagcaaatagtt
tccatatatgaagattgcgaatcttctttgttgagaaacttaactcagtatgaacctaaa
gggatatttcctgatttaacagacactttgaagttttttaagggggctttcaatcacgaa
caagcagagaaagatggatctattattcctaaatctggcgttgatagcgattatgacaga
gttcagttggacatagaagaaattaataaagagctgcagaaatatcttaaggaacaatcg
aaatattttggctgtgaagttacttattttggaacagacaagaaaaggtatcagttggta
attcctgaaaataaagcccgtaaagctgatgattcttattatttagaaggacaaaagaaa
ggagcaaaaccagtgaagagatttacaacagatacaacaaaggaacttcttcaaaagatg
atgaaggctgaagctgaaaggaataaaataatcagagacttgaatcggagaatttttgaa
aaatttagtcaaaagtctgaagaatggcaacaagtaatccactgtctcacagttttagac
cttctctgctcattggcacaatatgcccggaaatattcaggagatatttgcaaaccagat
gtccaagaattctctaaaaacccgtttatttcaattgctaatggaaaattacctaacgcc
ccctacatagataattttgtaccaaacgacacgagtttaggtggccaagatgcagcgccg
ctgttaattttgacaggtccaaatatgggcggtaaatccactttgatgaggcaggtttcc
ataatttgcatcatggcacaaatgggtagttttgtaccagcatcgaaatgttcattgagc
ttaatagaccggatattcacgagactaggggcgtgcgacgacataattaggggacaatcc
acgtttttcgtcgaattaagtgaagcctcgatgatactgaagcacgccacgaagcagtcg
ttgttaattgttgatgaattgggaagaggaacctcaactcatgatggtaatgccatagcg
acagcttatgtgaggaagcttgtggaaatgaaatgccgtacaatattttcaacgcattat
cacagtttggttgatcattttgttgatgataaaaacgtgcatttggggcacatggcgtgt
atggtggaaaacgatgacgatccatcagaggaatcagtcattcttctgtacaaactggca
gaaggtaggtgtcctaagtcgtatggtttcaacgcggccaaactggctggcgttaaggcc
gaagtcgttgccagagcccgcactatcgctaaagagatcgaggatgaagacctgtacaga
aggacttttacaacgatattcagtagaaaatcagatccagaatacgtcaagcagttactt
aagaacctaaaaatataa
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